G492167


Basic Information

Item Value
gene id G492167
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10550628 ~ 10551042 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564543
GACTCTCGAAGTTTCAGGGTGGTGTGAATAGTCGACAAATGTTGAAATCTAGCCTTTAATAAGATTCATCTCGTAAACAGCGTCACCAAACTTGTGATAGCCTATGTTAATCCGAATCTATCCACTGCTTTTTCACTTGGCGAAACTGTTGAATACCGCAACAAACCACATTTTATACAAATAAAGTTGGAATGGGTACATGCTCTATACATCCAGTCACAGAAATGCGTTTACAGACACACCCCGGAGCGGGAGTGTTTTGCTATTCAAAGCAATATGTGATGAGATGTTACCTGTGCGATTGTTTATCTGATCTGACGCTTGCTTTTATTGCCTTTTTGAAAACGTCTCAAACCGAACTCCTTTCAAATGAAAAAACAGTGCAACACAATTTAATTTAAAAGGACATTTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564543 True 415 lncRNA 0.38 1 10550628 10551042

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 84105 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 155361 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 194528 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 296175 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 299860 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 93384 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 179631 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 230426 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 239330 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 317195 10868237 ~ 10870398 (+)
G492166 NA non-coding upstream 341 10549916 ~ 10550287 (+)
G492165 NA non-coding upstream 2034 10548374 ~ 10548594 (+)
G492164 NA non-coding upstream 7093 10543248 ~ 10543535 (+)
G492163 NA non-coding upstream 8947 10541450 ~ 10541681 (+)
G492162 NA non-coding upstream 12623 10537799 ~ 10538005 (+)
G492168 NA non-coding downstream 136 10551178 ~ 10551951 (+)
G492223 NA non-coding downstream 91790 10642832 ~ 10643509 (+)
G492226 NA non-coding downstream 128308 10679350 ~ 10679596 (+)
G492227 NA non-coding downstream 129045 10680087 ~ 10680435 (+)
G492230 NA non-coding downstream 137542 10688584 ~ 10688862 (+)
G490896 NA other upstream 705576 9831473 ~ 9845052 (+)
G490839 NA other upstream 1313069 9234973 ~ 9237559 (+)
G490826 NA other upstream 1419231 9125184 ~ 9131397 (+)
G490645 NA other upstream 1507527 9038812 ~ 9043101 (+)
G489634 NA other upstream 3849840 6694221 ~ 6700788 (+)
G492194 NA other downstream 100641 10651683 ~ 10652694 (+)
G492847 NA other downstream 1058064 11609106 ~ 11696961 (+)
G493617 NA other downstream 2504350 13055392 ~ 13069652 (+)
G493740 NA other downstream 2964185 13515227 ~ 13517111 (+)

Expression


Co-expression Network