G492227


Basic Information

Item Value
gene id G492227
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10680087 ~ 10680435 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564610
CTTTTATGTGACTTCAGAAAAAAGTGTGGCCATAGCCTTCCATGGCCAAAGCCTGGCTCACTGCCGAAGCTAAGCGGGCTCAAGCCAGCACTGAAAAAAAATAAATCGTAAAAAAATGGTCAATGACTGTCAGCTATGGCTGCCAAACAAAAACCTTAAAATTAAAGTAAAATATTCTAATTTAAATAAAGTGTAAAAAACTTTAACAGAAATTTTCATTAAAATTTTTTCCTACAAAACACTTATCTTACAGGTATTCCCTGAATTATTACAAAAAAACACCTTCACTGCAAAACATAATCGTAAAAAAAAAAAAAAAAAGGTCAGATGACTTTCAGCAAAGGCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564610 True 349 lncRNA 0.33 1 10680087 10680435

Neighbor

gene id symbol gene type direction distance location
CI01000340_10644426_10645811 GPX1, GPX1B coding upstream 34237 10644426 ~ 10645850 (+)
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 213564 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 284820 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 323987 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 425634 10252718 ~ 10254453 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 50238 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 101033 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 109937 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 187802 10868237 ~ 10870398 (+)
CI01000340_10882106_10884072 NA coding downstream 200536 10880971 ~ 10884198 (+)
G492226 NA non-coding upstream 491 10679350 ~ 10679596 (+)
G492223 NA non-coding upstream 36578 10642832 ~ 10643509 (+)
G492168 NA non-coding upstream 128136 10551178 ~ 10551951 (+)
G492167 NA non-coding upstream 129045 10550628 ~ 10551042 (+)
G492166 NA non-coding upstream 129800 10549916 ~ 10550287 (+)
G492230 NA non-coding downstream 8149 10688584 ~ 10688862 (+)
G492190 NA non-coding downstream 9411 10689846 ~ 10692943 (+)
G492249 NA non-coding downstream 70212 10750647 ~ 10750873 (+)
G492399 NA non-coding downstream 180004 10860439 ~ 10860702 (+)
G492402 NA non-coding downstream 183385 10863820 ~ 10864055 (+)
G492194 NA other upstream 27393 10651683 ~ 10652694 (+)
G490896 NA other upstream 835035 9831473 ~ 9845052 (+)
G490839 NA other upstream 1442528 9234973 ~ 9237559 (+)
G490826 NA other upstream 1548690 9125184 ~ 9131397 (+)
G490645 NA other upstream 1636986 9038812 ~ 9043101 (+)
G492847 NA other downstream 928671 11609106 ~ 11696961 (+)
G493617 NA other downstream 2374957 13055392 ~ 13069652 (+)
G493740 NA other downstream 2834792 13515227 ~ 13517111 (+)
G493782 NA other downstream 3141759 13822194 ~ 13923213 (+)

Expression


Co-expression Network