Gene
RNA
| Item | Value |
|---|---|
| gene id | G492230 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 10688584 ~ 10688862 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564613 | True | 279 | lncRNA | 0.35 | 1 | 10688584 | 10688862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_10644426_10645811 | GPX1, GPX1B | coding | upstream | 42734 | 10644426 ~ 10645850 (+) |
| CI01000340_10455853_10465771 | OXTRL, OXTR | coding | upstream | 222061 | 10455299 ~ 10466523 (+) |
| CI01000340_10388851_10395247 | NA | coding | upstream | 293317 | 10388629 ~ 10395267 (+) |
| CI01000340_10296583_10355505 | SRGAP3 | coding | upstream | 332484 | 10296583 ~ 10356100 (+) |
| CI01000340_10252718_10253859 | NA | coding | upstream | 434131 | 10252718 ~ 10254453 (+) |
| CI01000340_10731548_10747121 | MST1RA | coding | downstream | 41811 | 10730673 ~ 10747648 (+) |
| CI01000340_10781781_10785861 | CAMKVA, CAMKVB, CAMKV | coding | downstream | 92606 | 10781468 ~ 10787792 (+) |
| CI01000340_10790372_10803993 | NA | coding | downstream | 101510 | 10790372 ~ 10804399 (+) |
| CI01000340_10869243_10869956 | NA | coding | downstream | 179375 | 10868237 ~ 10870398 (+) |
| CI01000340_10882106_10884072 | NA | coding | downstream | 192109 | 10880971 ~ 10884198 (+) |
| G492227 | NA | non-coding | upstream | 8149 | 10680087 ~ 10680435 (+) |
| G492226 | NA | non-coding | upstream | 8988 | 10679350 ~ 10679596 (+) |
| G492223 | NA | non-coding | upstream | 45075 | 10642832 ~ 10643509 (+) |
| G492168 | NA | non-coding | upstream | 136633 | 10551178 ~ 10551951 (+) |
| G492167 | NA | non-coding | upstream | 137542 | 10550628 ~ 10551042 (+) |
| G492190 | NA | non-coding | downstream | 984 | 10689846 ~ 10692943 (+) |
| G492249 | NA | non-coding | downstream | 61785 | 10750647 ~ 10750873 (+) |
| G492399 | NA | non-coding | downstream | 171577 | 10860439 ~ 10860702 (+) |
| G492402 | NA | non-coding | downstream | 174958 | 10863820 ~ 10864055 (+) |
| CI01000340_10915894_10921086 | GNAT1, GNAT, GNAT1.S | non-coding | downstream | 226902 | 10915764 ~ 10921200 (+) |
| G492194 | NA | other | upstream | 35890 | 10651683 ~ 10652694 (+) |
| G490896 | NA | other | upstream | 843532 | 9831473 ~ 9845052 (+) |
| G490839 | NA | other | upstream | 1451025 | 9234973 ~ 9237559 (+) |
| G490826 | NA | other | upstream | 1557187 | 9125184 ~ 9131397 (+) |
| G490645 | NA | other | upstream | 1645483 | 9038812 ~ 9043101 (+) |
| G492847 | NA | other | downstream | 920244 | 11609106 ~ 11696961 (+) |
| G493617 | NA | other | downstream | 2366530 | 13055392 ~ 13069652 (+) |
| G493740 | NA | other | downstream | 2826365 | 13515227 ~ 13517111 (+) |
| G493782 | NA | other | downstream | 3133332 | 13822194 ~ 13923213 (+) |
