Gene
RNA
| Item | Value |
|---|---|
| gene id | G492402 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 10863820 ~ 10864055 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564808 | True | 236 | lncRNA | 0.32 | 1 | 10863820 | 10864055 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_10790372_10803993 | NA | coding | upstream | 59421 | 10790372 ~ 10804399 (+) |
| CI01000340_10781781_10785861 | CAMKVA, CAMKVB, CAMKV | coding | upstream | 77469 | 10781468 ~ 10787792 (+) |
| CI01000340_10731548_10747121 | MST1RA | coding | upstream | 116172 | 10730673 ~ 10747648 (+) |
| CI01000340_10644426_10645811 | GPX1, GPX1B | coding | upstream | 217970 | 10644426 ~ 10645850 (+) |
| CI01000340_10455853_10465771 | OXTRL, OXTR | coding | upstream | 397297 | 10455299 ~ 10466523 (+) |
| CI01000340_10869243_10869956 | NA | coding | downstream | 4182 | 10868237 ~ 10870398 (+) |
| CI01000340_10882106_10884072 | NA | coding | downstream | 16916 | 10880971 ~ 10884198 (+) |
| CI01000340_10896398_10912573 | SEMA3FA, SEMA3F | coding | downstream | 32179 | 10896234 ~ 10912704 (+) |
| CI01000340_10915894_10921086 | GNAT1, GNAT, GNAT1.S | coding | downstream | 51839 | 10915764 ~ 10921200 (+) |
| CI01000340_10975991_10979709 | TCTA | coding | downstream | 111256 | 10975311 ~ 10980045 (+) |
| G492399 | NA | non-coding | upstream | 3118 | 10860439 ~ 10860702 (+) |
| G492249 | NA | non-coding | upstream | 112947 | 10750647 ~ 10750873 (+) |
| G492190 | NA | non-coding | upstream | 170877 | 10689846 ~ 10692943 (+) |
| G492230 | NA | non-coding | upstream | 174958 | 10688584 ~ 10688862 (+) |
| G492227 | NA | non-coding | upstream | 183385 | 10680087 ~ 10680435 (+) |
| G492416 | NA | non-coding | downstream | 63054 | 10927109 ~ 10927501 (+) |
| G492420 | NA | non-coding | downstream | 66511 | 10930566 ~ 10931507 (+) |
| G492405 | NA | non-coding | downstream | 70795 | 10934850 ~ 10936632 (+) |
| G492421 | NA | non-coding | downstream | 123335 | 10987390 ~ 10988734 (+) |
| G492194 | NA | other | upstream | 211126 | 10651683 ~ 10652694 (+) |
| G490896 | NA | other | upstream | 1018768 | 9831473 ~ 9845052 (+) |
| G490839 | NA | other | upstream | 1626261 | 9234973 ~ 9237559 (+) |
| G490826 | NA | other | upstream | 1732423 | 9125184 ~ 9131397 (+) |
| G492847 | NA | other | downstream | 745051 | 11609106 ~ 11696961 (+) |
| G493617 | NA | other | downstream | 2191337 | 13055392 ~ 13069652 (+) |
| G493740 | NA | other | downstream | 2651172 | 13515227 ~ 13517111 (+) |
| G493782 | NA | other | downstream | 2958139 | 13822194 ~ 13923213 (+) |
| CI01000340_14100335_14108817 | SLC16A1A | other | downstream | 3233576 | 14099138 ~ 14108941 (+) |
