Gene
RNA
| Item | Value |
|---|---|
| gene id | G492586 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 10959813 ~ 10960064 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU565002 | True | 252 | lncRNA | 0.40 | 1 | 10959813 | 10960064 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_10951922_10954429 | NA | coding | downstream | 5377 | 10951834 ~ 10954436 (-) |
| CI01000340_10935675_10941448 | ARL8B, ARL8BA, ARL8A | coding | downstream | 18132 | 10935332 ~ 10941681 (-) |
| CI01000340_10924696_10934000 | EDEM1 | coding | downstream | 25813 | 10924384 ~ 10934000 (-) |
| CI01000340_10690474_10697545 | IP6K2, IP6K2A | coding | downstream | 260222 | 10689932 ~ 10699591 (-) |
| CI01000340_10667602_10671566 | SC61A, SEC61A1.S, S61A1, SEC61A1L, SEC61A1 | coding | downstream | 288247 | 10667532 ~ 10671566 (-) |
| CI01000340_10962027_10966453 | NA | coding | upstream | 1660 | 10961724 ~ 10967360 (-) |
| CI01000340_10980323_10984372 | GLYCTK | coding | upstream | 20022 | 10980086 ~ 10984372 (-) |
| CI01000340_11005204_11007357 | LRRN1 | coding | upstream | 44374 | 11004438 ~ 11007434 (-) |
| CI01000340_11086607_11088953 | NA | coding | upstream | 126095 | 11086159 ~ 11089394 (-) |
| CI01000340_11092046_11095664 | TRNT1 | coding | upstream | 131231 | 11091295 ~ 11095664 (-) |
| G492551 | NA | non-coding | downstream | 43146 | 10915322 ~ 10916667 (-) |
| G492400 | NA | non-coding | downstream | 99113 | 10860431 ~ 10860700 (-) |
| G492392 | NA | non-coding | downstream | 118143 | 10841453 ~ 10841670 (-) |
| G492385 | NA | non-coding | downstream | 133393 | 10826199 ~ 10826420 (-) |
| G492356 | NA | non-coding | downstream | 162544 | 10793259 ~ 10797269 (-) |
| G492600 | NA | non-coding | upstream | 64868 | 11024932 ~ 11025149 (-) |
| G492603 | NA | non-coding | upstream | 69400 | 11029464 ~ 11029680 (-) |
| G492619 | NA | non-coding | upstream | 98218 | 11058282 ~ 11058772 (-) |
| G492630 | NA | non-coding | upstream | 117572 | 11077636 ~ 11077841 (-) |
| G492627 | NA | non-coding | upstream | 136590 | 11096654 ~ 11099325 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 597409 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 931830 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 2160236 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 4632441 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 4739171 | 6095704 ~ 6194501 (-) |
| G493109 | NA | other | upstream | 713682 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 1107113 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 1652152 | 12577435 ~ 12625758 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 3253284 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 3586935 | 14546999 ~ 14552983 (-) |
