Gene
RNA
| Item | Value |
|---|---|
| gene id | G492619 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 11058282 ~ 11058772 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU565038 | True | 491 | lncRNA | 0.49 | 1 | 11058282 | 11058772 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11005204_11007357 | LRRN1 | coding | downstream | 50848 | 11004438 ~ 11007434 (-) |
| CI01000340_10980323_10984372 | GLYCTK | coding | downstream | 73910 | 10980086 ~ 10984372 (-) |
| CI01000340_10962027_10966453 | NA | coding | downstream | 90922 | 10961724 ~ 10967360 (-) |
| CI01000340_10951922_10954429 | NA | coding | downstream | 103846 | 10951834 ~ 10954436 (-) |
| CI01000340_10935675_10941448 | ARL8B, ARL8BA, ARL8A | coding | downstream | 116601 | 10935332 ~ 10941681 (-) |
| CI01000340_11086607_11088953 | NA | coding | upstream | 27387 | 11086159 ~ 11089394 (-) |
| CI01000340_11092046_11095664 | TRNT1 | coding | upstream | 32523 | 11091295 ~ 11095664 (-) |
| CI01000340_11107554_11132757 | FRMD4B | coding | upstream | 48723 | 11107495 ~ 11132757 (-) |
| CI01000340_11185627_11192539 | EEVS | coding | upstream | 125332 | 11184104 ~ 11192539 (-) |
| CI01000340_11219006_11225062 | NA | coding | upstream | 159802 | 11218574 ~ 11225062 (-) |
| G492603 | NA | non-coding | downstream | 28602 | 11029464 ~ 11029680 (-) |
| G492600 | NA | non-coding | downstream | 33133 | 11024932 ~ 11025149 (-) |
| G492586 | NA | non-coding | downstream | 98218 | 10959813 ~ 10960064 (-) |
| G492551 | NA | non-coding | downstream | 141615 | 10915322 ~ 10916667 (-) |
| G492400 | NA | non-coding | downstream | 197582 | 10860431 ~ 10860700 (-) |
| G492630 | NA | non-coding | upstream | 18864 | 11077636 ~ 11077841 (-) |
| G492627 | NA | non-coding | upstream | 37882 | 11096654 ~ 11099325 (-) |
| G493017 | NA | non-coding | upstream | 400277 | 11459049 ~ 11461355 (-) |
| G493057 | NA | non-coding | upstream | 442208 | 11500980 ~ 11501497 (-) |
| G493066 | NA | non-coding | upstream | 454930 | 11513702 ~ 11513978 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 695878 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 1030299 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 2258705 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 4730910 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 4837640 | 6095704 ~ 6194501 (-) |
| G493109 | NA | other | upstream | 614974 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 1008405 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 1553444 | 12577435 ~ 12625758 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 3154576 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 3488227 | 14546999 ~ 14552983 (-) |
