Gene
RNA
| Item | Value |
|---|---|
| gene id | G493074 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 11530233 ~ 11530567 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU565575 | True | 335 | lncRNA | 0.39 | 1 | 11530233 | 11530567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11450930_11478248 | NA | coding | downstream | 51790 | 11450759 ~ 11478443 (-) |
| CI01000340_11317716_11330576 | NA | coding | downstream | 198743 | 11317407 ~ 11331490 (-) |
| CI01000340_11283491_11314856 | FOXP1B | coding | downstream | 215377 | 11283128 ~ 11314856 (-) |
| CI01000340_11219006_11225062 | NA | coding | downstream | 305171 | 11218574 ~ 11225062 (-) |
| CI01000340_11185627_11192539 | EEVS | coding | downstream | 337694 | 11184104 ~ 11192539 (-) |
| CI01000340_11553900_11576481 | RYBPB, RYBP | coding | upstream | 21813 | 11552380 ~ 11576827 (-) |
| CI01000340_11609366_11648905 | SHQ1 | coding | upstream | 78799 | 11609366 ~ 11648905 (-) |
| CI01000340_11679110_11679311 | NA | coding | upstream | 148269 | 11678836 ~ 11679311 (-) |
| CI01000340_11695434_11705476 | PDZRN3B, PDZRN3 | coding | upstream | 164108 | 11694675 ~ 11705798 (-) |
| CI01000340_11779096_11787055 | NA | coding | upstream | 248524 | 11779091 ~ 11788759 (-) |
| G493066 | NA | non-coding | downstream | 16255 | 11513702 ~ 11513978 (-) |
| G493057 | NA | non-coding | downstream | 28736 | 11500980 ~ 11501497 (-) |
| G493017 | NA | non-coding | downstream | 68878 | 11459049 ~ 11461355 (-) |
| G492627 | NA | non-coding | downstream | 430908 | 11096654 ~ 11099325 (-) |
| G492630 | NA | non-coding | downstream | 452392 | 11077636 ~ 11077841 (-) |
| G493075 | NA | non-coding | upstream | 358 | 11530925 ~ 11531183 (-) |
| G493110 | NA | non-coding | upstream | 120154 | 11650721 ~ 11662939 (-) |
| G493157 | NA | non-coding | upstream | 350468 | 11881035 ~ 11881508 (-) |
| G493060 | NA | non-coding | upstream | 452496 | 11983063 ~ 11983698 (-) |
| G493196 | NA | non-coding | upstream | 482288 | 12012855 ~ 12013244 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 1167829 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 1502250 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 2730656 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 5202861 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 5309591 | 6095704 ~ 6194501 (-) |
| G493109 | NA | other | upstream | 143179 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 536610 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 1081649 | 12577435 ~ 12625758 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 2682781 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 3016432 | 14546999 ~ 14552983 (-) |
