Gene
RNA
| Item | Value |
|---|---|
| gene id | G493315 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 12145712 ~ 12145986 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU565851 | True | 275 | lncRNA | 0.29 | 1 | 12145712 | 12145986 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11903883_11956886 | CNTN3B | coding | downstream | 188826 | 11903780 ~ 11956886 (-) |
| CI01000340_11779096_11787055 | NA | coding | downstream | 356953 | 11779091 ~ 11788759 (-) |
| CI01000340_11695434_11705476 | PDZRN3B, PDZRN3 | coding | downstream | 439914 | 11694675 ~ 11705798 (-) |
| CI01000340_11679110_11679311 | NA | coding | downstream | 466401 | 11678836 ~ 11679311 (-) |
| CI01000340_11609366_11648905 | SHQ1 | coding | downstream | 496807 | 11609366 ~ 11648905 (-) |
| CI01000340_12515377_12519838 | NA | coding | upstream | 368760 | 12514746 ~ 12519980 (-) |
| CI01000340_12532321_12545278 | EPHA2A | coding | upstream | 386253 | 12532239 ~ 12545388 (-) |
| CI01000340_12562841_12563343 | NA | coding | upstream | 416607 | 12562593 ~ 12563343 (-) |
| CI01000340_12571142_12574655 | TARDBPL, TARDBP | coding | upstream | 425035 | 12571021 ~ 12574678 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | coding | upstream | 431449 | 12577435 ~ 12625758 (-) |
| G493311 | NA | non-coding | downstream | 11459 | 12133171 ~ 12134253 (-) |
| G493309 | NA | non-coding | downstream | 14637 | 12130634 ~ 12131075 (-) |
| G493266 | NA | non-coding | downstream | 36103 | 12067177 ~ 12116900 (-) |
| G493267 | NA | non-coding | downstream | 58972 | 12022932 ~ 12086740 (-) |
| G493268 | NA | non-coding | downstream | 120456 | 12024496 ~ 12025256 (-) |
| G493330 | NA | non-coding | upstream | 47485 | 12193471 ~ 12193797 (-) |
| G493402 | NA | non-coding | upstream | 168114 | 12314100 ~ 12314301 (-) |
| G493403 | NA | non-coding | upstream | 168418 | 12314404 ~ 12314623 (-) |
| G493893 | NA | non-coding | upstream | 208142 | 12354128 ~ 12375232 (-) |
| G493894 | NA | non-coding | upstream | 208832 | 12354818 ~ 12355089 (-) |
| G493109 | NA | other | downstream | 467718 | 11673746 ~ 11677994 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 1783308 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 2117729 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 3346135 | 8799201 ~ 8799577 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 2067362 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 2401013 | 14546999 ~ 14552983 (-) |
| G494872 | NA | other | upstream | 2411637 | 14557623 ~ 14559023 (-) |
| G495475 | NA | other | upstream | 3460755 | 15606741 ~ 15612563 (-) |
