Gene
RNA
| Item | Value |
|---|---|
| gene id | G493894 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 12354818 ~ 12355089 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566517 | True | 252 | lncRNA | 0.31 | 2 | 12354818 | 12355089 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11903883_11956886 | CNTN3B | coding | downstream | 397932 | 11903780 ~ 11956886 (-) |
| CI01000340_11779096_11787055 | NA | coding | downstream | 566059 | 11779091 ~ 11788759 (-) |
| CI01000340_11695434_11705476 | PDZRN3B, PDZRN3 | coding | downstream | 649020 | 11694675 ~ 11705798 (-) |
| CI01000340_11679110_11679311 | NA | coding | downstream | 675507 | 11678836 ~ 11679311 (-) |
| CI01000340_11609366_11648905 | SHQ1 | coding | downstream | 705913 | 11609366 ~ 11648905 (-) |
| CI01000340_12515377_12519838 | NA | coding | upstream | 159657 | 12514746 ~ 12519980 (-) |
| CI01000340_12532321_12545278 | EPHA2A | coding | upstream | 177150 | 12532239 ~ 12545388 (-) |
| CI01000340_12562841_12563343 | NA | coding | upstream | 207504 | 12562593 ~ 12563343 (-) |
| CI01000340_12571142_12574655 | TARDBPL, TARDBP | coding | upstream | 215932 | 12571021 ~ 12574678 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | coding | upstream | 222346 | 12577435 ~ 12625758 (-) |
| G493403 | NA | non-coding | downstream | 40195 | 12314404 ~ 12314623 (-) |
| G493402 | NA | non-coding | downstream | 40517 | 12314100 ~ 12314301 (-) |
| G493330 | NA | non-coding | downstream | 161021 | 12193471 ~ 12193797 (-) |
| G493315 | NA | non-coding | downstream | 208832 | 12145712 ~ 12145986 (-) |
| G493311 | NA | non-coding | downstream | 220565 | 12133171 ~ 12134253 (-) |
| G493901 | NA | non-coding | upstream | 22158 | 12377247 ~ 12377503 (-) |
| G493904 | NA | non-coding | upstream | 35918 | 12391007 ~ 12391331 (-) |
| G493905 | NA | non-coding | upstream | 42714 | 12397803 ~ 12398117 (-) |
| G493906 | NA | non-coding | upstream | 53257 | 12408346 ~ 12408670 (-) |
| G493907 | NA | non-coding | upstream | 54733 | 12409822 ~ 12410041 (-) |
| G493266 | NA | other | downstream | 237918 | 12067177 ~ 12116900 (-) |
| G493109 | NA | other | downstream | 676824 | 11673746 ~ 11677994 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 1992414 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 2326835 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 3555241 | 8799201 ~ 8799577 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 1858259 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 2191910 | 14546999 ~ 14552983 (-) |
| G494872 | NA | other | upstream | 2202534 | 14557623 ~ 14559023 (-) |
| G495475 | NA | other | upstream | 3251652 | 15606741 ~ 15612563 (-) |
