Gene
RNA
| Item | Value |
|---|---|
| gene id | G493909 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 12418193 ~ 12418434 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| arginine/serine-rich coiled-coil protein 2-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566533 | True | 242 | lncRNA | 0.34 | 1 | 12418193 | 12418434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11903883_11956886 | CNTN3B | coding | downstream | 461307 | 11903780 ~ 11956886 (-) |
| CI01000340_11779096_11787055 | NA | coding | downstream | 629434 | 11779091 ~ 11788759 (-) |
| CI01000340_11695434_11705476 | PDZRN3B, PDZRN3 | coding | downstream | 712395 | 11694675 ~ 11705798 (-) |
| CI01000340_11679110_11679311 | NA | coding | downstream | 738882 | 11678836 ~ 11679311 (-) |
| CI01000340_11609366_11648905 | SHQ1 | coding | downstream | 769288 | 11609366 ~ 11648905 (-) |
| CI01000340_12515377_12519838 | NA | coding | upstream | 96312 | 12514746 ~ 12519980 (-) |
| CI01000340_12532321_12545278 | EPHA2A | coding | upstream | 113805 | 12532239 ~ 12545388 (-) |
| CI01000340_12562841_12563343 | NA | coding | upstream | 144159 | 12562593 ~ 12563343 (-) |
| CI01000340_12571142_12574655 | TARDBPL, TARDBP | coding | upstream | 152587 | 12571021 ~ 12574678 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | coding | upstream | 159001 | 12577435 ~ 12625758 (-) |
| G493908 | NA | non-coding | downstream | 997 | 12416958 ~ 12417196 (-) |
| G493907 | NA | non-coding | downstream | 8152 | 12409822 ~ 12410041 (-) |
| G493906 | NA | non-coding | downstream | 9523 | 12408346 ~ 12408670 (-) |
| G493905 | NA | non-coding | downstream | 20076 | 12397803 ~ 12398117 (-) |
| G493904 | NA | non-coding | downstream | 26862 | 12391007 ~ 12391331 (-) |
| G493910 | NA | non-coding | upstream | 1774 | 12420208 ~ 12420545 (-) |
| G493917 | NA | non-coding | upstream | 19032 | 12437466 ~ 12437726 (-) |
| G493918 | NA | non-coding | upstream | 19324 | 12437758 ~ 12437987 (-) |
| G493919 | NA | non-coding | upstream | 25049 | 12443483 ~ 12443735 (-) |
| G493920 | NA | non-coding | upstream | 26082 | 12444516 ~ 12444717 (-) |
| G493266 | NA | other | downstream | 301293 | 12067177 ~ 12116900 (-) |
| G493109 | NA | other | downstream | 740199 | 11673746 ~ 11677994 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 2055789 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 2390210 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 3618616 | 8799201 ~ 8799577 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 1794914 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 2128565 | 14546999 ~ 14552983 (-) |
| G494872 | NA | other | upstream | 2139189 | 14557623 ~ 14559023 (-) |
| G495475 | NA | other | upstream | 3188307 | 15606741 ~ 15612563 (-) |
