Gene
RNA
| Item | Value |
|---|---|
| gene id | G493955 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 12446243 ~ 12446442 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566586 | True | 200 | lncRNA | 0.50 | 1 | 12446243 | 12446442 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_11903883_11956886 | CNTN3B | coding | downstream | 489357 | 11903780 ~ 11956886 (-) |
| CI01000340_11779096_11787055 | NA | coding | downstream | 657484 | 11779091 ~ 11788759 (-) |
| CI01000340_11695434_11705476 | PDZRN3B, PDZRN3 | coding | downstream | 740445 | 11694675 ~ 11705798 (-) |
| CI01000340_11679110_11679311 | NA | coding | downstream | 766932 | 11678836 ~ 11679311 (-) |
| CI01000340_11609366_11648905 | SHQ1 | coding | downstream | 797338 | 11609366 ~ 11648905 (-) |
| CI01000340_12515377_12519838 | NA | coding | upstream | 68304 | 12514746 ~ 12519980 (-) |
| CI01000340_12532321_12545278 | EPHA2A | coding | upstream | 85797 | 12532239 ~ 12545388 (-) |
| CI01000340_12562841_12563343 | NA | coding | upstream | 116151 | 12562593 ~ 12563343 (-) |
| CI01000340_12571142_12574655 | TARDBPL, TARDBP | coding | upstream | 124579 | 12571021 ~ 12574678 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | coding | upstream | 130993 | 12577435 ~ 12625758 (-) |
| G493920 | NA | non-coding | downstream | 1526 | 12444516 ~ 12444717 (-) |
| G493919 | NA | non-coding | downstream | 2508 | 12443483 ~ 12443735 (-) |
| G493918 | NA | non-coding | downstream | 8256 | 12437758 ~ 12437987 (-) |
| G493917 | NA | non-coding | downstream | 8517 | 12437466 ~ 12437726 (-) |
| G493910 | NA | non-coding | downstream | 25698 | 12420208 ~ 12420545 (-) |
| G493956 | NA | non-coding | upstream | 2349 | 12448791 ~ 12449022 (-) |
| G493987 | NA | non-coding | upstream | 267185 | 12713627 ~ 12713979 (-) |
| G493942 | NA | non-coding | upstream | 313785 | 12760227 ~ 12760573 (-) |
| G493939 | NA | non-coding | upstream | 314349 | 12760791 ~ 12812189 (-) |
| G494005 | NA | non-coding | upstream | 379224 | 12825666 ~ 12826157 (-) |
| G493266 | NA | other | downstream | 329343 | 12067177 ~ 12116900 (-) |
| G493109 | NA | other | downstream | 768249 | 11673746 ~ 11677994 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 2083839 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 2418260 | 10025656 ~ 10029589 (-) |
| G491712 | NA | other | downstream | 3646666 | 8799201 ~ 8799577 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 1766906 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 2100557 | 14546999 ~ 14552983 (-) |
| G494872 | NA | other | upstream | 2111181 | 14557623 ~ 14559023 (-) |
| G495475 | NA | other | upstream | 3160299 | 15606741 ~ 15612563 (-) |
