Gene
RNA
| Item | Value |
|---|---|
| gene id | G494210 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 13936058 ~ 13936413 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU566880 | True | 356 | lncRNA | 0.33 | 1 | 13936058 | 13936413 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_13774456_13796883 | PPM1J, PPM1H | coding | downstream | 139175 | 13774300 ~ 13796883 (-) |
| CI01000340_13748766_13759247 | CAPZA1A | coding | downstream | 176368 | 13748766 ~ 13759690 (-) |
| CI01000340_13737144_13746426 | ST7L | coding | downstream | 189632 | 13737144 ~ 13746426 (-) |
| CI01000340_13619069_13627493 | SLC2A1B, GLUT1A | coding | downstream | 308565 | 13618371 ~ 13627493 (-) |
| CI01000340_13604658_13605013 | NA | coding | downstream | 330241 | 13604384 ~ 13605817 (-) |
| CI01000340_14121598_14122814 | NA | coding | upstream | 185054 | 14121467 ~ 14122814 (-) |
| CI01000340_14124155_14131724 | SLC5A8L | coding | upstream | 187460 | 14123873 ~ 14131736 (-) |
| CI01000340_14152734_14153363 | NA | coding | upstream | 215762 | 14152175 ~ 14153363 (-) |
| CI01000340_14183801_14186441 | NGF, NGFB | coding | upstream | 247081 | 14183494 ~ 14186441 (-) |
| CI01000340_14255925_14261708 | NA | coding | upstream | 319344 | 14255757 ~ 14261753 (-) |
| G494203 | NA | non-coding | downstream | 7404 | 13928393 ~ 13928654 (-) |
| G494045 | NA | non-coding | downstream | 251674 | 13681274 ~ 13684384 (-) |
| G494096 | NA | non-coding | downstream | 450344 | 13484797 ~ 13485714 (-) |
| G494076 | NA | non-coding | downstream | 849697 | 13086112 ~ 13086361 (-) |
| G494014 | NA | non-coding | downstream | 1033705 | 12902147 ~ 12902353 (-) |
| G494322 | NA | non-coding | upstream | 106161 | 14042574 ~ 14043062 (-) |
| G494334 | NA | non-coding | upstream | 114077 | 14050490 ~ 14050723 (-) |
| G494688 | NA | non-coding | upstream | 133907 | 14070320 ~ 14070619 (-) |
| G494696 | NA | non-coding | upstream | 154565 | 14090978 ~ 14091221 (-) |
| G494702 | NA | non-coding | upstream | 164587 | 14101000 ~ 14101313 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 1262533 | 12577435 ~ 12625758 (-) |
| G493266 | NA | other | downstream | 1819158 | 12067177 ~ 12116900 (-) |
| G493109 | NA | other | downstream | 2258064 | 11673746 ~ 11677994 (-) |
| CI01000340_10357202_10357606 | NA | other | downstream | 3573654 | 10356758 ~ 10359856 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | downstream | 3908075 | 10025656 ~ 10029589 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 276935 | 14318365 ~ 14336258 (-) |
| CI01000340_14547725_14551493 | NA | other | upstream | 610586 | 14546999 ~ 14552983 (-) |
| G494872 | NA | other | upstream | 621210 | 14557623 ~ 14559023 (-) |
| G495475 | NA | other | upstream | 1670328 | 15606741 ~ 15612563 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 2235264 | 16171677 ~ 16178314 (-) |
