G494779


Basic Information

Item Value
gene id G494779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14181466 ~ 14181972 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU567473
GACATGGGGGTGAGTAAATTATCAGGAAATTTTTATTTGAAAGTGGACTAATCCTTTAAAGGGAATGCTTAAAGGCATAGTTCACCCAAAAACAGAAATTCAGTCATTGTTTATTCACCCTGTTGGCATTATAATGCCATATATCTTTTCTTTTTAAGACCCCATACGACTCATGTCATATTTTCCAAGTGTTCCGAGGGCATATGGGTTTGGTCAAAAACACATCAAAATTTAATTTATTATTTAGTGAAAATCCTGCACAATTATTTCAGAAGTATAATCATAACACCAAACATTACATGTTAGCATGACACTGGTTTGATCGAATTGCTTATCAAAAAGTTAAACCCAGTTAAACTTTGGTATTTGCACAAGAATTCCAGTAATGGACATAGAAGGAAACCAGGAATTATATTGGTAGGGCATAACCAGAACTTTATCCACCAAGAAAAGTAGTTCCACCTTAAATTGGTGGATTTTTGGCCATTTTACAGGTTACTTCATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567473 True 507 lncRNA 0.34 1 14181466 14181972

Neighbor

gene id symbol gene type direction distance location
CI01000340_14152734_14153363 NA coding downstream 28103 14152175 ~ 14153363 (-)
CI01000340_14124155_14131724 SLC5A8L coding downstream 49730 14123873 ~ 14131736 (-)
CI01000340_14121598_14122814 NA coding downstream 58652 14121467 ~ 14122814 (-)
CI01000340_13774456_13796883 PPM1J, PPM1H coding downstream 384583 13774300 ~ 13796883 (-)
CI01000340_13748766_13759247 CAPZA1A coding downstream 421776 13748766 ~ 13759690 (-)
CI01000340_14183801_14186441 NGF, NGFB coding upstream 1522 14183494 ~ 14186441 (-)
CI01000340_14255925_14261708 NA coding upstream 73785 14255757 ~ 14261753 (-)
CI01000340_14309675_14311339 RPLP2 coding upstream 127671 14309643 ~ 14311436 (-)
CI01000340_14318434_14336130 NA coding upstream 136415 14318365 ~ 14336258 (-)
CI01000340_14384828_14388836 APCDD1L coding upstream 202120 14384092 ~ 14389433 (-)
G494727 NA non-coding downstream 39278 14134758 ~ 14142188 (-)
G494702 NA non-coding downstream 80153 14101000 ~ 14101313 (-)
G494696 NA non-coding downstream 90245 14090978 ~ 14091221 (-)
G494688 NA non-coding downstream 110847 14070320 ~ 14070619 (-)
G494334 NA non-coding downstream 130743 14050490 ~ 14050723 (-)
G494812 NA non-coding upstream 100740 14282712 ~ 14284064 (-)
G494767 NA non-coding upstream 170036 14352008 ~ 14352223 (-)
G494762 NA non-coding upstream 197398 14379370 ~ 14382292 (-)
G494740 NA non-coding upstream 248921 14430893 ~ 14432098 (-)
G494729 NA non-coding upstream 257394 14439366 ~ 14440204 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 1507941 12577435 ~ 12625758 (-)
G493266 NA other downstream 2064566 12067177 ~ 12116900 (-)
G493109 NA other downstream 2503472 11673746 ~ 11677994 (-)
CI01000340_10357202_10357606 NA other downstream 3819062 10356758 ~ 10359856 (-)
CI01000340_10025958_10028902 SRSF3 other downstream 4153483 10025656 ~ 10029589 (-)
CI01000340_14547725_14551493 NA other upstream 365027 14546999 ~ 14552983 (-)
G494872 NA other upstream 375651 14557623 ~ 14559023 (-)
G495475 NA other upstream 1424769 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 1989705 16171677 ~ 16178314 (-)

Expression


Co-expression Network