G494740


Basic Information

Item Value
gene id G494740
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14430893 ~ 14432098 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU567434
TACATTTTACAGGAAACTTGATGAAGAGGGACCCAATTAGATTTATAAGCATATGAATAATGGTGTGAAATGAGACTGACCACAATGCAGCGGTTGCTGCCAGCAGGCAGGCAGGTTCGGACCAGACGGGTGAGGAAGTGGGCAGATGATGGGCTGTTGTGACGGCTGACTCGTGAAGGAAGGGCTGCCACAGCTGCATGACTCAAATACAGTGGGCAACTATCCGTAGGGTTGGGGTTGAGAGAAGACAAAGCTGCCTGCCATATCTGAATGCAAATACTCTTTTGTGACCACTGGCTGCAGTTTCCCTTTCACCTGGGTCCAGTTGATCTGTTGCAGATTGGCGAGCTGGCCGACGATGAGGACCGGGCGGTTCTGCGGCTCTGAGTCCCCGGCAGAAGCCTTGAACTCGAGCACTACGTTCGCCATCTTCCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU567434 True 437 lncRNA 0.53 2 14430893 14432098

Neighbor

gene id symbol gene type direction distance location
CI01000340_14384828_14388836 APCDD1L coding downstream 41460 14384092 ~ 14389433 (-)
CI01000340_14318434_14336130 NA coding downstream 94635 14318365 ~ 14336258 (-)
CI01000340_14309675_14311339 RPLP2 coding downstream 119457 14309643 ~ 14311436 (-)
CI01000340_14255925_14261708 NA coding downstream 169140 14255757 ~ 14261753 (-)
CI01000340_14183801_14186441 NGF, NGFB coding downstream 244452 14183494 ~ 14186441 (-)
CI01000340_14442412_14444888 NA coding upstream 9316 14441414 ~ 14444910 (-)
CI01000340_14455602_14462035 NELFD, NELFCD coding upstream 23504 14455602 ~ 14463807 (-)
CI01000340_14467309_14496470 GNAS.L, MGC68706, GNAS coding upstream 34871 14466969 ~ 14496563 (-)
CI01000340_14506530_14506877 NA coding upstream 74308 14506406 ~ 14506877 (-)
CI01000340_14515689_14516087 ATP5E coding upstream 83311 14515341 ~ 14516739 (-)
G494762 NA non-coding downstream 48601 14379370 ~ 14382292 (-)
G494767 NA non-coding downstream 78670 14352008 ~ 14352223 (-)
G494812 NA non-coding downstream 146829 14282712 ~ 14284064 (-)
G494779 NA non-coding downstream 248921 14181466 ~ 14181972 (-)
G494727 NA non-coding downstream 288705 14134758 ~ 14142188 (-)
G494729 NA non-coding upstream 7268 14439366 ~ 14440204 (-)
G494851 NA non-coding upstream 14652 14446750 ~ 14447088 (-)
G494852 NA non-coding upstream 15086 14447184 ~ 14447517 (-)
G494719 NA non-coding upstream 32160 14464258 ~ 14465928 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 1757368 12577435 ~ 12625758 (-)
G493266 NA other downstream 2313993 12067177 ~ 12116900 (-)
G493109 NA other downstream 2752899 11673746 ~ 11677994 (-)
CI01000340_10357202_10357606 NA other downstream 4068489 10356758 ~ 10359856 (-)
CI01000340_14547725_14551493 NA other upstream 114901 14546999 ~ 14552983 (-)
G494872 NA other upstream 125525 14557623 ~ 14559023 (-)
G495475 NA other upstream 1174643 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 1739579 16171677 ~ 16178314 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other upstream 2082801 16514899 ~ 16518531 (-)

Expression


Co-expression Network