Gene
RNA
| Item | Value |
|---|---|
| gene id | G495504 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 15472524 ~ 15472833 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: ankyrin-1-like isoform X8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU568302 | True | 310 | lncRNA | 0.37 | 1 | 15472524 | 15472833 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_15433393_15440042 | PSMF1 | coding | downstream | 32337 | 15433316 ~ 15440187 (-) |
| CI01000340_15418307_15418626 | BLCAP.S, GM3852, BC10, BLCAP | coding | downstream | 53898 | 15417772 ~ 15418667 (-) |
| CI01000340_15334006_15357378 | CHD6 | coding | downstream | 115146 | 15333088 ~ 15357378 (-) |
| CI01000340_15318569_15329407 | RBL1 | coding | downstream | 142021 | 15318532 ~ 15330503 (-) |
| CI01000340_15312803_15315594 | NA | coding | downstream | 156930 | 15312741 ~ 15315594 (-) |
| CI01000340_15549307_15555642 | RIMS4 | coding | upstream | 75642 | 15548475 ~ 15557779 (-) |
| CI01000340_15559928_15562340 | NA | coding | upstream | 86769 | 15559602 ~ 15562340 (-) |
| CI01000340_15614801_15623230 | TOMM34 | coding | upstream | 141894 | 15614727 ~ 15623456 (-) |
| CI01000340_15666594_15673044 | IF6, EIF6.S, EIF6 | coding | upstream | 193627 | 15666460 ~ 15673044 (-) |
| CI01000340_15677629_15704765 | MMP24 | coding | upstream | 204757 | 15677590 ~ 15706680 (-) |
| G495502 | NA | non-coding | downstream | 5195 | 15467062 ~ 15467329 (-) |
| G495415 | NA | non-coding | downstream | 40995 | 15431216 ~ 15431529 (-) |
| G495459 | NA | non-coding | downstream | 42415 | 15425649 ~ 15430109 (-) |
| G495450 | NA | non-coding | downstream | 177524 | 15294273 ~ 15295000 (-) |
| G495530 | NA | non-coding | upstream | 53697 | 15526530 ~ 15526746 (-) |
| G495534 | NA | non-coding | upstream | 60896 | 15533729 ~ 15533957 (-) |
| G495538 | NA | non-coding | upstream | 112686 | 15585519 ~ 15585808 (-) |
| G495539 | NA | non-coding | upstream | 114320 | 15587153 ~ 15587443 (-) |
| G495475 | NA | non-coding | upstream | 133908 | 15606741 ~ 15612563 (-) |
| G494872 | NA | other | downstream | 913501 | 14557623 ~ 14559023 (-) |
| CI01000340_14547725_14551493 | NA | other | downstream | 917356 | 14546999 ~ 14552983 (-) |
| CI01000340_14318434_14336130 | NA | other | downstream | 1152247 | 14318365 ~ 14336258 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 2798999 | 12577435 ~ 12625758 (-) |
| G493266 | NA | other | downstream | 3355624 | 12067177 ~ 12116900 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 698844 | 16171677 ~ 16178314 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | upstream | 1042066 | 16514899 ~ 16518531 (-) |
| G496845 | NA | other | upstream | 1570890 | 17043723 ~ 17045688 (-) |
| G496853 | NA | other | upstream | 1704659 | 17177492 ~ 17242739 (-) |
