Gene
RNA
| Item | Value |
|---|---|
| gene id | G495539 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 15587153 ~ 15587443 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU568337 | True | 291 | lncRNA | 0.36 | 1 | 15587153 | 15587443 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_15559928_15562340 | NA | coding | downstream | 24813 | 15559602 ~ 15562340 (-) |
| CI01000340_15549307_15555642 | RIMS4 | coding | downstream | 29374 | 15548475 ~ 15557779 (-) |
| CI01000340_15433393_15440042 | PSMF1 | coding | downstream | 146966 | 15433316 ~ 15440187 (-) |
| CI01000340_15418307_15418626 | BLCAP.S, GM3852, BC10, BLCAP | coding | downstream | 168527 | 15417772 ~ 15418667 (-) |
| CI01000340_15334006_15357378 | CHD6 | coding | downstream | 229775 | 15333088 ~ 15357378 (-) |
| CI01000340_15614801_15623230 | TOMM34 | coding | upstream | 27284 | 15614727 ~ 15623456 (-) |
| CI01000340_15666594_15673044 | IF6, EIF6.S, EIF6 | coding | upstream | 79017 | 15666460 ~ 15673044 (-) |
| CI01000340_15677629_15704765 | MMP24 | coding | upstream | 90147 | 15677590 ~ 15706680 (-) |
| CI01000340_15723386_15729584 | FAM83C | coding | upstream | 135667 | 15723110 ~ 15729978 (-) |
| CI01000340_15741859_15763888 | NA | coding | upstream | 153914 | 15741357 ~ 15763888 (-) |
| G495538 | NA | non-coding | downstream | 1345 | 15585519 ~ 15585808 (-) |
| G495534 | NA | non-coding | downstream | 53196 | 15533729 ~ 15533957 (-) |
| G495530 | NA | non-coding | downstream | 60407 | 15526530 ~ 15526746 (-) |
| G495504 | NA | non-coding | downstream | 114320 | 15472524 ~ 15472833 (-) |
| G495502 | NA | non-coding | downstream | 119824 | 15467062 ~ 15467329 (-) |
| G495475 | NA | non-coding | upstream | 19298 | 15606741 ~ 15612563 (-) |
| G495485 | NA | non-coding | upstream | 26056 | 15613499 ~ 15623995 (-) |
| G495545 | NA | non-coding | upstream | 47073 | 15634516 ~ 15634737 (-) |
| G495491 | NA | non-coding | upstream | 133707 | 15721150 ~ 15722591 (-) |
| G495581 | NA | non-coding | upstream | 266245 | 15853688 ~ 15853903 (-) |
| G494872 | NA | other | downstream | 1028130 | 14557623 ~ 14559023 (-) |
| CI01000340_14547725_14551493 | NA | other | downstream | 1031985 | 14546999 ~ 14552983 (-) |
| CI01000340_14318434_14336130 | NA | other | downstream | 1266876 | 14318365 ~ 14336258 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 2913628 | 12577435 ~ 12625758 (-) |
| G493266 | NA | other | downstream | 3470253 | 12067177 ~ 12116900 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 584234 | 16171677 ~ 16178314 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | upstream | 927456 | 16514899 ~ 16518531 (-) |
| G496845 | NA | other | upstream | 1456280 | 17043723 ~ 17045688 (-) |
| G496853 | NA | other | upstream | 1590049 | 17177492 ~ 17242739 (-) |
