Gene
RNA
| Item | Value |
|---|---|
| gene id | G495545 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 15634516 ~ 15634737 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU568343 | True | 222 | lncRNA | 0.38 | 1 | 15634516 | 15634737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_15614801_15623230 | TOMM34 | coding | downstream | 11060 | 15614727 ~ 15623456 (-) |
| CI01000340_15559928_15562340 | NA | coding | downstream | 72176 | 15559602 ~ 15562340 (-) |
| CI01000340_15549307_15555642 | RIMS4 | coding | downstream | 76737 | 15548475 ~ 15557779 (-) |
| CI01000340_15433393_15440042 | PSMF1 | coding | downstream | 194329 | 15433316 ~ 15440187 (-) |
| CI01000340_15418307_15418626 | BLCAP.S, GM3852, BC10, BLCAP | coding | downstream | 215890 | 15417772 ~ 15418667 (-) |
| CI01000340_15666594_15673044 | IF6, EIF6.S, EIF6 | coding | upstream | 31723 | 15666460 ~ 15673044 (-) |
| CI01000340_15677629_15704765 | MMP24 | coding | upstream | 42853 | 15677590 ~ 15706680 (-) |
| CI01000340_15723386_15729584 | FAM83C | coding | upstream | 88373 | 15723110 ~ 15729978 (-) |
| CI01000340_15741859_15763888 | NA | coding | upstream | 106620 | 15741357 ~ 15763888 (-) |
| CI01000340_15802368_15806754 | GDF5 | coding | upstream | 166156 | 15800893 ~ 15807394 (-) |
| G495485 | NA | non-coding | downstream | 10521 | 15613499 ~ 15623995 (-) |
| G495475 | NA | non-coding | downstream | 24016 | 15606741 ~ 15612563 (-) |
| G495539 | NA | non-coding | downstream | 47073 | 15587153 ~ 15587443 (-) |
| G495538 | NA | non-coding | downstream | 48708 | 15585519 ~ 15585808 (-) |
| G495534 | NA | non-coding | downstream | 100559 | 15533729 ~ 15533957 (-) |
| G495491 | NA | non-coding | upstream | 86413 | 15721150 ~ 15722591 (-) |
| G495581 | NA | non-coding | upstream | 218951 | 15853688 ~ 15853903 (-) |
| G495582 | NA | non-coding | upstream | 220905 | 15855642 ~ 15857831 (-) |
| G495587 | NA | non-coding | upstream | 224222 | 15858959 ~ 15859189 (-) |
| G495588 | NA | non-coding | upstream | 224658 | 15859395 ~ 15859739 (-) |
| G494872 | NA | other | downstream | 1075493 | 14557623 ~ 14559023 (-) |
| CI01000340_14547725_14551493 | NA | other | downstream | 1079348 | 14546999 ~ 14552983 (-) |
| CI01000340_14318434_14336130 | NA | other | downstream | 1314239 | 14318365 ~ 14336258 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 2960991 | 12577435 ~ 12625758 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 536940 | 16171677 ~ 16178314 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | upstream | 880162 | 16514899 ~ 16518531 (-) |
| G496845 | NA | other | upstream | 1408986 | 17043723 ~ 17045688 (-) |
| G496853 | NA | other | upstream | 1542755 | 17177492 ~ 17242739 (-) |
| CI01000340_18419431_18419838 | NA | other | upstream | 2784581 | 18419058 ~ 18421201 (-) |
