Gene
RNA
| Item | Value |
|---|---|
| gene id | G495586 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 15895481 ~ 15895819 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU568387 | True | 339 | lncRNA | 0.53 | 1 | 15895481 | 15895819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_15863675_15876969 | RBPJL | coding | downstream | 18512 | 15863670 ~ 15876969 (-) |
| CI01000340_15843587_15847043 | OSER1 | coding | downstream | 48386 | 15843161 ~ 15847095 (-) |
| CI01000340_15818649_15820582 | NA | coding | downstream | 74899 | 15817880 ~ 15820582 (-) |
| CI01000340_15802368_15806754 | GDF5 | coding | downstream | 88087 | 15800893 ~ 15807394 (-) |
| CI01000340_15741859_15763888 | NA | coding | downstream | 131593 | 15741357 ~ 15763888 (-) |
| CI01000340_16001904_16003536 | FAM212AB | coding | upstream | 106015 | 16001834 ~ 16003536 (-) |
| CI01000340_16006372_16024582 | GNAI2 | coding | upstream | 110521 | 16006340 ~ 16027056 (-) |
| CI01000340_16053984_16057786 | GNAI1 | coding | upstream | 158091 | 16053910 ~ 16058901 (-) |
| CI01000340_16061769_16080354 | SLC38A3B, SLC38A3 | coding | upstream | 165688 | 16061507 ~ 16080354 (-) |
| CI01000340_16101493_16104784 | NA | coding | upstream | 204095 | 16099914 ~ 16104935 (-) |
| G495585 | NA | non-coding | downstream | 12000 | 15882952 ~ 15883481 (-) |
| G495597 | NA | non-coding | downstream | 14972 | 15880305 ~ 15880509 (-) |
| G495588 | NA | non-coding | downstream | 35742 | 15859395 ~ 15859739 (-) |
| G495587 | NA | non-coding | downstream | 36292 | 15858959 ~ 15859189 (-) |
| G495582 | NA | non-coding | downstream | 37650 | 15855642 ~ 15857831 (-) |
| G495600 | NA | non-coding | upstream | 3024 | 15898843 ~ 15899074 (-) |
| G495584 | NA | non-coding | upstream | 5251 | 15901070 ~ 15901879 (-) |
| G495603 | NA | non-coding | upstream | 23048 | 15918867 ~ 15919291 (-) |
| G495615 | NA | non-coding | upstream | 29591 | 15925410 ~ 15929378 (-) |
| G495475 | NA | other | downstream | 282918 | 15606741 ~ 15612563 (-) |
| G494872 | NA | other | downstream | 1336458 | 14557623 ~ 14559023 (-) |
| CI01000340_14547725_14551493 | NA | other | downstream | 1340313 | 14546999 ~ 14552983 (-) |
| CI01000340_14318434_14336130 | NA | other | downstream | 1575204 | 14318365 ~ 14336258 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 3221956 | 12577435 ~ 12625758 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 275858 | 16171677 ~ 16178314 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | upstream | 619080 | 16514899 ~ 16518531 (-) |
| G496845 | NA | other | upstream | 1147904 | 17043723 ~ 17045688 (-) |
| G496853 | NA | other | upstream | 1281673 | 17177492 ~ 17242739 (-) |
| CI01000340_18419431_18419838 | NA | other | upstream | 2523499 | 18419058 ~ 18421201 (-) |
