G496659


Basic Information

Item Value
gene id G496659
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 16580113 ~ 16580492 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU569643
GTGACCCAAAGCTTTGTAATAATTTTTATTGTGAACTTGATTGGAACAGTTACTACACTGACATGAAGAGTAGAACACATCAGCCCAGTCTAAACATACAGTATATACACACACACACATCACCTCCTCCATCCTGCTCTTAAAGACATAATCCATTACAGCTGAGCCCGAGTGAGCTCCCACACTAAAAACAACGCTACAGTGTTAAAAACAAATGACAAATTAAATTATTGTTGTGCTACATAAGTTATGGATCGCATGTTAAAAGACATTTCCATTTACATAAAGAGACAAAAAGGCAAAAGAAATACTTAAAAGCATTTGAACATACTTTTCAATAGCATGTGCCCAGATATCACTGTGAACCACACAGTTCAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU569643 True 380 lncRNA 0.36 1 16580113 16580492

Neighbor

gene id symbol gene type direction distance location
CI01000340_16540718_16544143 RPS10, RPS10-NUDT3, RPS10.L coding downstream 35970 16540718 ~ 16544143 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 coding downstream 61582 16514899 ~ 16518531 (-)
CI01000340_16502291_16507977 HYAL2, HYAL2A coding downstream 70165 16501927 ~ 16509948 (-)
CI01000340_16492560_16496822 NA coding downstream 82151 16492141 ~ 16497962 (-)
CI01000340_16408042_16409453 NA coding downstream 167177 16407985 ~ 16412936 (-)
CI01000340_16584213_16590736 SPDEF coding upstream 3489 16583981 ~ 16592930 (-)
CI01000340_16616356_16625161 C20H6ORF106, C26H6ORF106, C11H6ORF106, CLG3H6ORF106, CLG2H6ORF106, C23H6ORF106, CUNH6ORF106, C4H6ORF106 coding upstream 35063 16615555 ~ 16625161 (-)
CI01000340_16656861_16660297 NA coding upstream 76016 16656508 ~ 16660297 (-)
CI01000340_16661934_16665857 SYS1 coding upstream 81041 16661533 ~ 16666655 (-)
CI01000340_16672630_16676596 NA coding upstream 92063 16672555 ~ 16676622 (-)
G496658 NA non-coding downstream 257 16578942 ~ 16579856 (-)
G496651 NA non-coding downstream 52958 16525546 ~ 16527155 (-)
G496641 NA non-coding downstream 120204 16459641 ~ 16459909 (-)
G495682 NA non-coding downstream 264983 16311206 ~ 16315130 (-)
G495668 NA non-coding downstream 293779 16285926 ~ 16286334 (-)
G496685 NA non-coding upstream 62132 16642624 ~ 16643141 (-)
G496698 NA non-coding upstream 114647 16695139 ~ 16695401 (-)
G496699 NA non-coding upstream 126236 16706728 ~ 16707060 (-)
G496671 NA non-coding upstream 131024 16711516 ~ 16712367 (-)
G496701 NA non-coding upstream 146811 16727303 ~ 16727528 (-)
CI01000340_16175837_16177624 NA other downstream 400028 16171677 ~ 16178314 (-)
G495475 NA other downstream 967550 15606741 ~ 15612563 (-)
G494872 NA other downstream 2021090 14557623 ~ 14559023 (-)
CI01000340_14547725_14551493 NA other downstream 2024945 14546999 ~ 14552983 (-)
G496845 NA other upstream 463231 17043723 ~ 17045688 (-)
G496853 NA other upstream 597000 17177492 ~ 17242739 (-)
CI01000340_18419431_18419838 NA other upstream 1838826 18419058 ~ 18421201 (-)
G497442 NA other upstream 2578377 19158869 ~ 19166778 (-)

Expression


Co-expression Network