G496744


Basic Information

Item Value
gene id G496744
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 16812731 ~ 16812950 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU569749
CACAAGAAGCTCTCCATGACTAAGATGAAGACTCATCAGCCGATCAGATGTAAGGCATTAGTAACACAACACATGTACAGACAGTGCAGACCACACCCATGACAAAACTGCCCGGTAGTCATCTGCATGGGCAGGTCTCACTCGAGAAATGTGTCATCATTAATGTTAAAACATGTCAACGGCAAATGACAGCGCAAACTTTCAGACAATGTGTTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU569749 True 220 lncRNA 0.44 1 16812731 16812950

Neighbor

gene id symbol gene type direction distance location
CI01000340_16689196_16692384 NA coding downstream 119396 16689169 ~ 16693335 (-)
CI01000340_16672630_16676596 NA coding downstream 136109 16672555 ~ 16676622 (-)
CI01000340_16661934_16665857 SYS1 coding downstream 146076 16661533 ~ 16666655 (-)
CI01000340_16656861_16660297 NA coding downstream 152434 16656508 ~ 16660297 (-)
CI01000340_16616356_16625161 C20H6ORF106, C26H6ORF106, C11H6ORF106, CLG3H6ORF106, CLG2H6ORF106, C23H6ORF106, CUNH6ORF106, C4H6ORF106 coding downstream 187570 16615555 ~ 16625161 (-)
CI01000340_16835641_16841074 NA coding upstream 22300 16835250 ~ 16841074 (-)
CI01000340_16851655_16855749 TNNI1A, TNNI1B, TNNI1 coding upstream 38461 16851411 ~ 16855749 (-)
CI01000340_16864476_16870042 CSRP1, CSRP1A, CSRP1B coding upstream 51526 16864476 ~ 16870042 (-)
CI01000340_17053954_17065047 NA coding upstream 239427 17052377 ~ 17065047 (-)
CI01000340_17078619_17088012 UBE2C coding upstream 265669 17078619 ~ 17088012 (-)
G496713 NA non-coding downstream 33247 16778526 ~ 16779484 (-)
G496735 NA non-coding downstream 35001 16769114 ~ 16777730 (-)
G496705 NA non-coding downstream 79918 16732585 ~ 16732813 (-)
G496701 NA non-coding downstream 85203 16727303 ~ 16727528 (-)
G496671 NA non-coding downstream 100364 16711516 ~ 16712367 (-)
G496745 NA non-coding upstream 828 16813778 ~ 16814076 (-)
G496784 NA non-coding upstream 81069 16894019 ~ 16894238 (-)
G496797 NA non-coding upstream 115441 16928391 ~ 16966305 (-)
G496808 NA non-coding upstream 140816 16953766 ~ 16954687 (-)
G496825 NA non-coding upstream 145018 16957968 ~ 16958541 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 292757 16514899 ~ 16518531 (-)
CI01000340_16175837_16177624 NA other downstream 632646 16171677 ~ 16178314 (-)
G495475 NA other downstream 1200168 15606741 ~ 15612563 (-)
G494872 NA other downstream 2253708 14557623 ~ 14559023 (-)
CI01000340_14547725_14551493 NA other downstream 2257563 14546999 ~ 14552983 (-)
G496845 NA other upstream 230773 17043723 ~ 17045688 (-)
G496853 NA other upstream 364542 17177492 ~ 17242739 (-)
CI01000340_18419431_18419838 NA other upstream 1606368 18419058 ~ 18421201 (-)
G497442 NA other upstream 2345919 19158869 ~ 19166778 (-)

Expression


Co-expression Network