Gene
RNA
| Item | Value |
|---|---|
| gene id | G497092 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 18006655 ~ 18007015 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU570142 | True | 246 | lncRNA | 0.36 | 3 | 18006655 | 18007015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_17700896_17753828 | CDH22 | coding | downstream | 252827 | 17700825 ~ 17753828 (-) |
| CI01000340_17668871_17688583 | NA | coding | downstream | 317494 | 17668455 ~ 17689161 (-) |
| CI01000340_17451836_17453987 | NA | coding | downstream | 550672 | 17451452 ~ 17455983 (-) |
| CI01000340_17354694_17378496 | EYA2 | coding | downstream | 628159 | 17354254 ~ 17378496 (-) |
| CI01000340_17318768_17326504 | CYP24A1 | coding | downstream | 680111 | 17318100 ~ 17326544 (-) |
| CI01000340_18013773_18027276 | DDX27 | coding | upstream | 6516 | 18013531 ~ 18027276 (-) |
| CI01000340_18030360_18041157 | ITCHB, ITCHA, ITCH | coding | upstream | 23230 | 18030245 ~ 18041157 (-) |
| CI01000340_18091595_18104080 | CBFA2T2 | coding | upstream | 83793 | 18090808 ~ 18104080 (-) |
| CI01000340_18185156_18206837 | NA | coding | upstream | 177895 | 18184910 ~ 18206837 (-) |
| CI01000340_18228042_18229807 | NA | coding | upstream | 220160 | 18227175 ~ 18229807 (-) |
| G497081 | NA | non-coding | downstream | 42577 | 17963692 ~ 17964078 (-) |
| G497054 | NA | non-coding | downstream | 106056 | 17900375 ~ 17900599 (-) |
| G497053 | NA | non-coding | downstream | 113340 | 17892903 ~ 17893315 (-) |
| G497037 | NA | non-coding | downstream | 136571 | 17869865 ~ 17870084 (-) |
| G497025 | NA | non-coding | downstream | 172138 | 17810886 ~ 17834517 (-) |
| G497094 | NA | non-coding | upstream | 37167 | 18044182 ~ 18044454 (-) |
| G497099 | NA | non-coding | upstream | 43313 | 18050328 ~ 18051186 (-) |
| G497105 | NA | non-coding | upstream | 57110 | 18064125 ~ 18065085 (-) |
| G497044 | NA | non-coding | upstream | 155335 | 18162350 ~ 18166938 (-) |
| G497130 | NA | non-coding | upstream | 291454 | 18298469 ~ 18351804 (-) |
| G496853 | NA | other | downstream | 763916 | 17177492 ~ 17242739 (-) |
| G496845 | NA | other | downstream | 960967 | 17043723 ~ 17045688 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | downstream | 1486681 | 16514899 ~ 16518531 (-) |
| CI01000340_16175837_16177624 | NA | other | downstream | 1826570 | 16171677 ~ 16178314 (-) |
| G495475 | NA | other | downstream | 2394092 | 15606741 ~ 15612563 (-) |
| CI01000340_18419431_18419838 | NA | other | upstream | 412303 | 18419058 ~ 18421201 (-) |
| G497442 | NA | other | upstream | 1151854 | 19158869 ~ 19166778 (-) |
