Gene
RNA
| Item | Value |
|---|---|
| gene id | G497099 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 18050328 ~ 18051186 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU570151 | False | 319 | lncRNA | 0.31 | 2 | 18050328 | 18051186 |
| TU570149 | False | 396 | lncRNA | 0.32 | 2 | 18050728 | 18051186 |
| TU570150 | False | 396 | lncRNA | 0.33 | 2 | 18050728 | 18051186 |
| TU570152 | True | 354 | lncRNA | 0.32 | 2 | 18050728 | 18051186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_18030360_18041157 | ITCHB, ITCHA, ITCH | coding | downstream | 9171 | 18030245 ~ 18041157 (-) |
| CI01000340_18013773_18027276 | DDX27 | coding | downstream | 23052 | 18013531 ~ 18027276 (-) |
| CI01000340_17996222_18008569 | NA | coding | downstream | 39490 | 17995434 ~ 18010838 (-) |
| CI01000340_17700896_17753828 | CDH22 | coding | downstream | 296500 | 17700825 ~ 17753828 (-) |
| CI01000340_17668871_17688583 | NA | coding | downstream | 361167 | 17668455 ~ 17689161 (-) |
| CI01000340_18091595_18104080 | CBFA2T2 | coding | upstream | 39622 | 18090808 ~ 18104080 (-) |
| CI01000340_18185156_18206837 | NA | coding | upstream | 133724 | 18184910 ~ 18206837 (-) |
| CI01000340_18228042_18229807 | NA | coding | upstream | 175989 | 18227175 ~ 18229807 (-) |
| CI01000340_18302048_18303998 | NA | coding | upstream | 250202 | 18301388 ~ 18304048 (-) |
| CI01000340_18408556_18408855 | NA | coding | upstream | 357336 | 18408522 ~ 18408855 (-) |
| G497094 | NA | non-coding | downstream | 5874 | 18044182 ~ 18044454 (-) |
| G497092 | NA | non-coding | downstream | 43313 | 18006655 ~ 18007015 (-) |
| G497081 | NA | non-coding | downstream | 86250 | 17963692 ~ 17964078 (-) |
| G497054 | NA | non-coding | downstream | 149729 | 17900375 ~ 17900599 (-) |
| G497053 | NA | non-coding | downstream | 157013 | 17892903 ~ 17893315 (-) |
| G497105 | NA | non-coding | upstream | 12939 | 18064125 ~ 18065085 (-) |
| G497044 | NA | non-coding | upstream | 111164 | 18162350 ~ 18166938 (-) |
| G497130 | NA | non-coding | upstream | 247283 | 18298469 ~ 18351804 (-) |
| G497171 | NA | non-coding | upstream | 360094 | 18411280 ~ 18411572 (-) |
| G497173 | NA | non-coding | upstream | 363287 | 18414473 ~ 18414707 (-) |
| G496853 | NA | other | downstream | 807589 | 17177492 ~ 17242739 (-) |
| G496845 | NA | other | downstream | 1004640 | 17043723 ~ 17045688 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | downstream | 1530354 | 16514899 ~ 16518531 (-) |
| CI01000340_16175837_16177624 | NA | other | downstream | 1870243 | 16171677 ~ 16178314 (-) |
| G495475 | NA | other | downstream | 2437765 | 15606741 ~ 15612563 (-) |
| CI01000340_18419431_18419838 | NA | other | upstream | 368132 | 18419058 ~ 18421201 (-) |
| G497442 | NA | other | upstream | 1107683 | 19158869 ~ 19166778 (-) |
