XLOC_013724


Basic Information

Item Value
gene id XLOC_013724
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 653206 ~ 654596 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029845
GAGAGCCGCTCTGCTCGATATCTGGGCTGATGTTCAGAGTCTGCCGGTTGTCATTAATGGGACATTGGCTCCAGGGCAGCGGATCCTCAAATGAGTGGAAGAAATACCACAAAACCCAGGCCAGAATGGTGTTGTAAAACAGACCCACCAGGAAGGAGACGACCATTGATGCCACGCCTGCACACAGTACATCACATTTACACCATAATAACACTATAATGCCTTTATGAACTCATAAAACGCTTACACTAACTCACCTTGGAGAATCACTGCGTTGCACAACCAATCATAAAGCACACAACTGACAATAAAACCACATTTATCTGATCCAAAAAATGctaaacaatataataatgtcTAATTGCTGTTTGATAGGGAGATAtaatttaaagtgtaatttatttatgtgatgtaaagctgaattttcagattcactgcagtcttcagtgtctgtgatccttcagaaatctgtATAATAGGAGGATTTGATGattaagaatatattttaatattttatttgttgataATTGTGATGCACTAAc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029845 True 542 lncRNA 0.38 2 653206 654596

Neighbor

gene id symbol gene type direction distance location
XLOC_013723 tert coding upstream 10328 627899 ~ 642878 (+)
XLOC_013722 nup42 coding upstream 26053 619200 ~ 627153 (+)
XLOC_013721 akap9 coding upstream 66906 551963 ~ 586300 (+)
XLOC_013720 NA coding upstream 135832 510245 ~ 517374 (+)
XLOC_013719 CABZ01010098.1 coding upstream 145266 497953 ~ 507940 (+)
XLOC_013725 fhod3a coding downstream 57531 712127 ~ 768988 (+)
XLOC_013726 gstr coding downstream 115704 770300 ~ 776076 (+)
XLOC_013727 tmem79a coding downstream 136942 791538 ~ 796836 (+)
XLOC_013728 nrm coding downstream 161612 816208 ~ 822275 (+)
XLOC_013729 ppp1r18 coding downstream 169349 823945 ~ 840530 (+)
XLOC_013718 NA non-coding upstream 195696 439005 ~ 457510 (+)
XLOC_013717 NA non-coding upstream 216732 432600 ~ 436474 (+)
XLOC_013712 CR548627.1 non-coding upstream 317465 335627 ~ 335741 (+)
XLOC_013741 NA non-coding downstream 1032036 1686632 ~ 1687473 (+)
XLOC_013746 NA non-coding downstream 1295478 1950074 ~ 1952209 (+)
XLOC_013749 NA non-coding downstream 1576626 2231222 ~ 2234243 (+)
XLOC_013762 CT574549.1 non-coding downstream 2473316 3127912 ~ 3132931 (+)
XLOC_013764 NA non-coding downstream 2642758 3297354 ~ 3297818 (+)

Expression


Co-expression Network