XLOC_013764



Basic Information


Item Value
gene id XLOC_013764
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 3297354 ~ 3297818 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00029689
gctttagcaaacagttggacaggtgtacccaataaagtggccgctgagtgtagtTTTGCATCTTTTCTGAACAATTGATTTGCTAATAAAAAATTTCATGGTCACATTCACACCACTTTTCACGTTGGCAGATATTAAAAAACAACtcttagtttttaaaaatgtttttcatgaTCTGCTATCTGAACTACAAAAAGACCGTTCTTTTATTTACATGATAAGGTTGACATGAATCTATAAAATCCATATATTCAAACACTGATTTATCCGAGTAAGACAATATGATTAAGGtgattacatgagttgctttttgaatgacCCTTTCATGGTCCCGTTTCACACGTTATAGTAGATCGATAAACATCATTGCATCACTGCGGCTGTCCAATGTTTCCGCCAGAGTTTCACTTAATTCCGGCTggttcatttttagttttttgactttaactgcagtttggcactttc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00029689 True 465 lncRNA 0.35 1 3297354 3297818

Neighbor


gene id symbol gene type direction distance location
XLOC_013762 CT574549.1 coding upstream 164423 3127912 ~ 3132931 (+)
XLOC_013761 hsf1 coding upstream 215086 3056450 ~ 3082268 (+)
XLOC_013760 scxa coding upstream 287784 3001473 ~ 3009570 (+)
XLOC_013759 si:ch211-251g8.5 coding upstream 379225 2896188 ~ 2918129 (+)
XLOC_013758 hgh1 coding upstream 407413 2876106 ~ 2889941 (+)
XLOC_013765 NA coding downstream 276083 3573901 ~ 3578621 (+)
XLOC_013766 nedd9 coding downstream 356158 3653976 ~ 3707794 (+)
XLOC_013767 CT030005.3 coding downstream 428375 3726193 ~ 3737239 (+)
XLOC_013768 NA coding downstream 442747 3740565 ~ 3789221 (+)
XLOC_013769 NA coding downstream 462358 3760176 ~ 3785528 (+)
XLOC_013749 NA non-coding upstream 1063111 2231222 ~ 2234243 (+)
XLOC_013746 NA non-coding upstream 1345145 1950074 ~ 1952209 (+)
XLOC_013741 NA non-coding upstream 1609881 1686632 ~ 1687473 (+)
XLOC_013724 NA non-coding upstream 2642758 653206 ~ 654596 (+)
XLOC_013770 NA non-coding downstream 462580 3760398 ~ 3763670 (+)
XLOC_013771 NA non-coding downstream 465339 3763157 ~ 3776842 (+)

Expression



Co-expression Network