XLOC_013765


Basic Information

Item Value
gene id XLOC_013765
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 3573901 ~ 3578621 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027553
AAATCTGCCCGAGGATGGAGGACACATGGAGGCTCTTCACCGGCGCCGCTGCTCGCTGGAGGAGGATGGCAGAGCGCCGGTCCGTCTCATCAGCTCAGGGGCCATGATGGAAATGCTCATTATTAAACAGTGACTGAATGCCAGGTGATGTGAAGAGGACACCTGACACCTGAGCAGAGAGTGGGGAAATTGACCTTTGTGAAGAAATACAGCTCCTCTAAAGGGCCCAAGGGCGTGTTTCCAAAGGCAAAGAGAGTTATTCAGCTCCAAGGACATTGTGGGACTTGAAAGCATCACTAGTTGAACATAAACAAACCTAAAGCCCACATAAATTAATAGGATACATACACagggacttttcattttcagtgagCTGGCTTAgttccagtggtgtaaagtacttaAGTAAATGAACTTTGTTACTTTGCTTAAGTATTTTTTTGGGCTACTTTGTACTtgtactattaaaaatataagcaacttttactccctacttgactacatttttgattgaatatttgtactctttactccactacatttgaACGGACGCTTATAGTTACTCGTTACATTGTGATTGTGCGTGACAAGTCGGGACTGATGACCGTCCATGGCCTTATCTgaaagaaatgttttcatttgccgATATGCAAAATGCCTCTTACAGGATGCAGTGTCTACTATAATAAGTGCTTTTAAGAATTTATCGGAAAATTTGAGAAAACACATTGAAGTAAGAgtctatttaatgttaatttattgtGAATTAAGTGACTTTAATACAGTTACTGTTATGGCAAAAAGCACTGGGACATGACATGACTATGTTTTAGCTTAATGTTTTTGTGCAAtgtgaataaatgttttactgaTATTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027553 True 877 lncRNA 0.39 2 3573901 3578621

Neighbor

gene id symbol gene type direction distance location
XLOC_013763 zgc:86598 coding upstream 268286 3135271 ~ 3305615 (+)
XLOC_013764 NA coding upstream 276083 3297354 ~ 3297818 (+)
XLOC_013762 CT574549.1 coding upstream 440970 3127912 ~ 3132931 (+)
XLOC_013761 hsf1 coding upstream 491633 3056450 ~ 3082268 (+)
XLOC_013760 scxa coding upstream 564331 3001473 ~ 3009570 (+)
XLOC_013766 nedd9 coding downstream 75355 3653976 ~ 3707794 (+)
XLOC_013767 CT030005.3 coding downstream 147572 3726193 ~ 3737239 (+)
XLOC_013768 NA coding downstream 161944 3740565 ~ 3789221 (+)
XLOC_013769 NA coding downstream 181555 3760176 ~ 3785528 (+)
XLOC_013770 NA coding downstream 181777 3760398 ~ 3763670 (+)
XLOC_013749 NA non-coding upstream 1339658 2231222 ~ 2234243 (+)
XLOC_013746 NA non-coding upstream 1621692 1950074 ~ 1952209 (+)
XLOC_013741 NA non-coding upstream 1886428 1686632 ~ 1687473 (+)
XLOC_013771 NA non-coding downstream 184536 3763157 ~ 3776842 (+)
XLOC_013782 dre-mir-30a non-coding downstream 1158955 4737576 ~ 4737664 (+)

Expression


Co-expression Network