XLOC_013770


Basic Information

Item Value
gene id XLOC_013770
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 3760398 ~ 3763670 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029855
TCTCTCCCTTCCTGTCTACAGATTCTCTGACCACTCCTAAACTCCAGTCAGTCTTTCCCTTCAcctgaacCTCAAAATAAAATCTCCCTGAGGAGAATCCCTCCTTTCCCAGAACCATTGCATATCTATCAAATCTCTGTGGTTTGTTTGGGAGTTTCTGTCTGATGTCTCCATGTTTTACTTGTTTTCCATCATCAGACAGGATGAGTTTAGGATGAGCTGTATCAGGATCCAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029855 True 236 lncRNA 0.43 2 3760398 3763670

Neighbor

gene id symbol gene type direction distance location
XLOC_013767 CT030005.3 coding upstream 23159 3726193 ~ 3737239 (+)
XLOC_013766 nedd9 coding upstream 52604 3653976 ~ 3707794 (+)
XLOC_013765 NA coding upstream 181777 3573901 ~ 3578621 (+)
XLOC_013763 zgc:86598 coding upstream 454783 3135271 ~ 3305615 (+)
XLOC_013772 oscp1a coding downstream 63112 3826782 ~ 3846637 (+)
XLOC_013773 eva1bb coding downstream 85708 3849378 ~ 3862373 (+)
XLOC_013774 meaf6 coding downstream 260773 4024443 ~ 4033031 (+)
XLOC_013775 btr23 coding downstream 274919 4038589 ~ 4047224 (+)
XLOC_013776 btr24 coding downstream 287865 4051535 ~ 4057870 (+)
XLOC_013764 NA non-coding upstream 462580 3297354 ~ 3297818 (+)
XLOC_013762 CT574549.1 non-coding upstream 627467 3127912 ~ 3132931 (+)
XLOC_013749 NA non-coding upstream 1526155 2231222 ~ 2234243 (+)
XLOC_013746 NA non-coding upstream 1808189 1950074 ~ 1952209 (+)
XLOC_013782 dre-mir-30a non-coding downstream 973906 4737576 ~ 4737664 (+)
XLOC_013783 CABZ01063426.1 non-coding downstream 1007249 4770919 ~ 4771035 (+)
XLOC_013784 CU652215.1 non-coding downstream 1012622 4776292 ~ 4776413 (+)
XLOC_013787 NA non-coding downstream 1130567 4894237 ~ 4895341 (+)
XLOC_013788 NA non-coding downstream 1149139 4912809 ~ 5163694 (+)

Expression


Co-expression Network