XLOC_013810


Basic Information

Item Value
gene id XLOC_013810
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 6313208 ~ 6313504 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029694
ATGCAAACTAACTTTTTAAATGCAAACTAAATATCAATTGTAAATTCGATGATTCAGTTCACAAATCGGAAAGACTTAACTAAATCCAAGAAACGGTAAATGTGGTTCAAACAaggatgaattaataaaatagacATAAAGCAAACAGGAAAAGTCAAAGAGCGTTTATTATGTGACAGAAATATACAAGCGATTACTTTTTATTCTGCTCTGAAACAGGCTGGCGGACAGTAGAAAAGTTTGCATCTTGCAATTGCTGAATAACGATAAAGCTTCAAAATTATAAACCACAAAAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029694 True 297 lncRNA 0.31 1 6313208 6313504

Neighbor

gene id symbol gene type direction distance location
XLOC_013809 BX004874.1 coding upstream 217476 6095618 ~ 6095732 (+)
XLOC_013808 NA coding upstream 253437 6049221 ~ 6059771 (+)
XLOC_013807 NA coding upstream 278391 6034417 ~ 6034817 (+)
XLOC_013806 NA coding upstream 291134 6021747 ~ 6022074 (+)
XLOC_013805 pdk2b coding upstream 625465 5674907 ~ 5687743 (+)
XLOC_013811 NA coding downstream 70401 6383905 ~ 6406208 (+)
XLOC_013812 NA coding downstream 126907 6440411 ~ 6446309 (+)
XLOC_013813 CR391908.1 coding downstream 313669 6627173 ~ 6627290 (+)
XLOC_013814 FP074867.1 coding downstream 578317 6891821 ~ 6893275 (+)
XLOC_013815 zgc:162972 coding downstream 582680 6896184 ~ 6901351 (+)
XLOC_013800 BX323079.1 non-coding upstream 884874 5425832 ~ 5428334 (+)
XLOC_013821 NA non-coding downstream 674234 6987738 ~ 6988985 (+)
XLOC_013824 FP085393.1 non-coding downstream 721702 7035206 ~ 7035320 (+)

Expression


Co-expression Network