XLOC_013811


Basic Information

Item Value
gene id XLOC_013811
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 6383905 ~ 6406208 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029865
CTCTCATTGATCAGCCTTCACTTTGACGCAGTCACCGACCGTTGAGCCCGGTTACCCCTCCGGGCATCACGACATCACGATATCAGCATGTCAAAAACGACACAGAGACCGAGACACAGAACATCGCGTCATGTTGAAAGCCCCAGCTGgcgaatcagccaatcagaaaggagatGCTGTGAGCGTCCTTGCCGTCGACCTTGATGGAGTGCGAACTGGATGACTGAAAACAAGGCTTTACGAGAGGCATTGATAAATGGGTTTCAGCAGAGAGGAAGAGGATGAGATGAAGCAAAGAGAGGAAGGGGAAGATTAATGGCAGAGTATTGGTCAGGAAACGCACCAGTTCTGCGTTCGGCTTCCCCCCCATCTCACCTCCCCCTCGCTCCCACTACATCCATGTGCGTAAATGTTTCATAATCGCTGCATTTGTAGTCAAGAGAGCTTGAGGCTGGaatagaaaacacacacacacacacacatcaatgaaCGAGTCgtgctctctttttctctctctcgccTCCTTTCCTTGTTTTACACATGGGTGGGTTTGACAGGTGGTCTTCCGGAGCAATGACACACTATTACTGGCAGGTTCAGgtaggacaaacacacacacacacgtacacaggGGAAAGCCTGCATTATACAGCACCTCATTTAACAGCAAATGCATTTTGTGGAAAGCAGGAATGGAAGCAGAGCTCTGCATATTTCCCTGGTGCCATCAAAAAATTGGTGTCAGTCATTCTTTGGAAAGAAACATCTTTAGTACGCAAACTACCAGGAGCATTGCCAATATGCAGTCCTGTTGAACCtaaattacagtatatatatgaagagttcagatgtaaaaaaaaagtttgatttaaagggccatgaaaccccctcgtttcagcagtgtgttttcacacctctactttggaaaaagtcagaaagtGGCCGTGTCCAGCtatgtttaggggggagtgtcggaggaagaatgGAGGCtcggtgtgggagtgtctatttgggcgcgctgaatttcagagtcaaaacacacaaccacagcggacaaagtgactgtgtttacatggacatctgtagtcgaattatttgccaaattattaaatggtggactttaactgcagtttggctctttcattcagg

Function

GO:

id name namespace
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006281 DNA repair biological_process
GO:0044424 obsolete intracellular part cellular_component
GO:0005874 microtubule cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008017 microtubule binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko02020 Two-component system
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029865 True 1149 lncRNA 0.47 2 6383905 6406208

Neighbor

gene id symbol gene type direction distance location
XLOC_013810 NA coding upstream 70401 6313208 ~ 6313504 (+)
XLOC_013809 BX004874.1 coding upstream 288173 6095618 ~ 6095732 (+)
XLOC_013808 NA coding upstream 324134 6049221 ~ 6059771 (+)
XLOC_013807 NA coding upstream 349088 6034417 ~ 6034817 (+)
XLOC_013806 NA coding upstream 361831 6021747 ~ 6022074 (+)
XLOC_013812 NA coding downstream 34203 6440411 ~ 6446309 (+)
XLOC_013813 CR391908.1 coding downstream 220965 6627173 ~ 6627290 (+)
XLOC_013814 FP074867.1 coding downstream 485613 6891821 ~ 6893275 (+)
XLOC_013815 zgc:162972 coding downstream 489976 6896184 ~ 6901351 (+)
XLOC_013816 si:ch1073-127d16.1 coding downstream 498106 6904314 ~ 6908682 (+)
XLOC_013821 NA non-coding downstream 581530 6987738 ~ 6988985 (+)
XLOC_013824 FP085393.1 non-coding downstream 628998 7035206 ~ 7035320 (+)
XLOC_013832 FP101875.1 non-coding downstream 835909 7242117 ~ 7268026 (+)

Expression


Co-expression Network