XLOC_013832 (FP101875.1)


Basic Information

Item Value
gene id XLOC_013832
gene name FP101875.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 7242117 ~ 7268026 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027654
TGAGATGTGACAGAAACGGGTAATGTTGCAAACAAAATTTACAAATGGCACAGAGGAGTCATTGTAGGAGCTCTACCTGCCGGCGAAGAGAGGAACTGCAGGCGCACCTTACACAGTGAAACGGGCTTTGATGGAGAAAATGCACGACGTCGCATAATTTAGAAAGCTGCAAGCAATAAGAATGGAGGAGGAGTCAGAGTTGAGTCAGAAAATACCATTGGTTCGTTGGAGGAGTGACGTACAAGGAGCGCTCCCTCTCGCGGCCACGGCGCGTCACTGAAACCCCAGCATCGGCTCAGGGCCCGGGGGTCCTGCTGGACTGAAGACCAAACCAGCTCACCTAAGAGCCCGAGGGACCCCAAAACTAAAAAGACTCACCCAACTCACAAACGAAGAGCTTATTTTAGAAAACACAGAATGCTTAATGTGATGTACCAGAGGAGCGGTCTCCACAGATGGCACACAGGCGTTTCTGTGAAACCATGGGTCCTGGACTGTGAGAGGACAGCGGCTTCAAACCAAAGGGTGGCTTCACGTCATCGGAGCTGCTGACGGCATGCAGACCTGACATGGACAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093755

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027654 True 577 lncRNA 0.52 4 7242117 7268026

Neighbor

gene id symbol gene type direction distance location
XLOC_013831 hsd17b8 coding upstream 62423 7173613 ~ 7179694 (+)
XLOC_013830 brd2a coding upstream 71443 7152966 ~ 7170674 (+)
XLOC_013829 tap2a coding upstream 109802 7124337 ~ 7132315 (+)
XLOC_013828 psmb9a coding upstream 119744 7120380 ~ 7122373 (+)
XLOC_013827 psmb12 coding upstream 122661 7115223 ~ 7119456 (+)
XLOC_013834 NA coding downstream 6557 7274583 ~ 7275354 (+)
XLOC_013835 ccdc127b coding downstream 24419 7292445 ~ 7295926 (+)
XLOC_013836 sqleb coding downstream 31839 7299865 ~ 7308253 (+)
XLOC_013837 FP085394.1 coding downstream 38441 7306467 ~ 7306563 (+)
XLOC_013838 naxe coding downstream 140209 7408235 ~ 7412647 (+)
XLOC_013824 FP085393.1 non-coding upstream 206797 7035206 ~ 7035320 (+)
XLOC_013821 NA non-coding upstream 253132 6987738 ~ 6988985 (+)
XLOC_013813 CR391908.1 non-coding upstream 614827 6627173 ~ 6627290 (+)
XLOC_013812 NA non-coding upstream 795808 6440411 ~ 6446309 (+)
XLOC_013811 NA non-coding upstream 835909 6383905 ~ 6406208 (+)
XLOC_013841 BX927401.3 non-coding downstream 216191 7484217 ~ 7484331 (+)
XLOC_013862 NA non-coding downstream 693495 7961521 ~ 7965420 (+)
XLOC_013863 CR936442.1 non-coding downstream 698090 7966116 ~ 7968667 (+)

Expression


Co-expression Network