CI01000350_00095230_00102190


Basic Information

Item Value
gene id CI01000350_00095230_00102190
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 95230 ~ 102574 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_00095230_00102190.mRNA
CAGTCTCGTCCTTATGCTGCAGTCACAAGGGCTGGGCAAAATCCCTATCATCAGTCGTATCTGAGTTGGGCAACACGTGGCGCCAGCAACCAGTGTGCCGAGGCAGATACAGACAACCAGATAAGAGATGCTATTCTTAGCAAATGCACGTCAGATTATGTTCGTCGGAAATTATTAGAGGAAGGTCTGAGTCTAACACTTGCTCGCTCAGTGGAACTAGCATCACAGCGTGAGAGAATTGAAGAGCAGATGTCAGTCATGTCATTGAAACCTGATACGGGTACAGTCAATCGAGTGGCGCCAAAGAGAGACAAAAGAGAGAAAGGAAATAAAGGATACACCAGAAACAGACATGCAGAGAGAAAAGATGAAAAAATGGACAGGAAATGTTACAGATGTGGACACAAAGATCATTTTGGCAGAGACCAAACATGCCCTGCACGAGGTCAAGTATGCCACAAACGTAATGGAAAAGACCATTTTTCAAAAATGTGTCAAACGAAAAATCCAAAAAAGAATCATGTAAATAATATGGAGGAAGCTGATCATGCATTTGTCGTCCAGGAGAATACCATGTCAGAGAAACTGACTTTCCTTGTGGGTGGTGTGAAACTAAGACTGTTGATCGACTCGGGTGCCACAAATAATGTGATTGATGAGGAAACCTGGGAAAATCTCAAACAGAACAAAGTTAAATGCAAGTCATACATTCCTGAAACAGAGAGAAAGCTCTCCCCATACTCTTCAAACCAACCACTAGCAGTCAAGGGTGCGTTCCAATGCGAGGTGAACATATCCAACAAAACGGAACAGGCTGAATTCATCGTGATACAAGGAAAAGGAGAACCCCTCTTAGGACGAGAGACAGCTATCAAGCTGGGAGTGTTAAAAATAGGCGCTGACATCTCCGCCGTGACTGAAATAAAGCAAGCACTGCAACAAAACAATGGGGTTGGCAAGCTAAATATGAACCAAGTTACCCTACACATAGACCCAAGTGTGAGACCAGTAGCGCAGCCGCTCAGACGTATCCCGTTTCATCTCAGGAAAGCAGTAGAGCGGAAAATAAAGGAACTAATGGACATGGATATCATTGAACCTGTCAGTGGTCCCACACCATGGGTGAATCCTGTAGGCATTGTGCCTAAGGCAAACTCAGAAATAAGATTATGTCTGGACATGAGGCAGGCTAACTGTGCCATAGTGAGGGAGTGTTACACTATCCCTACTGTGGATGAGATTCTCCAAGGCATCAATGGCTCAACTATATTCAGCAAGCTGGATTTAAAATGGGATCCACTACGACGTTTAACAAAAAAGGAGACACACTTTGAGTTTGGGCCTGAACAAAGACGATCGTTCAATGCACTGAAAGAAGAACTGGCCAGAGCAAGCACATTGGCATACTTTGATATAGATGCACCAACCAAAGTGATTGCAGATGCAAGCCCAGTGGGGCTGGGAGCTGTCTTAGTTCAGACCCAAAAAGGGGCGACGGTACCAATATGTTATCTGAGTCGCTGTCTAACAGACTGTGAGCACAGATATTCACAGACAGAAAAAGAGGCCCTGGCTCTTGTGTGGGCATGTGATAGACTGCATGCTTACATTTATGGCCGAGAATTTGAGCTGGTCACTGACCACAAACCGCTAGAAGCCATATACAGTCCCCGCTCCAAACCCTGTGCCCGGATAGAAAGATGGGTACTTCGACTACAGCCATACAACTTCAGGGTCACATACCTACCAGGCAGGCAGAACATTGCAGACTCGCTGTCAAGACTGTTGGGTGAAACATCAAAAGCTGTAAGACATATACACAATTCAGAAGAATATGTCAGGTTTATCACAGTGAGTGCAACGCCTAATGCTTTGACCACTAGAGAGAGCAACAGCATCAGACATGTCAACACCACTCCCAAATGGGCTCAGGCTAATGGGGAGGTAGAACGCCAGAACTCATCGCTAATGAAAAGAATCCGAATTGCACAGGCTGAGAGACTTGATTGGAAAAAAGAGCTGAGAAAATATGTCACTGTGTATAGAAGAAGATTCAGGGAAAGTTACCCAACCTTTCAGAAGCATGTAAAGATCAAGAAGTATGTGACAGAGATGCAGAACAAAAAAGCAAAGGCAAAAAGATATGCAGATGACCGTCGGGGAGCACAATACTCGAATGTGAATGTAGGTGACACAGTGCTTGTGCAACAGGAAAAGGTGGATAAATTCACGACTCCATTTAACCCAATCCTGCACCAAGTCGTGAGCAAAACTGGAAACCAAGTGACTGTGGAATCACCCACTGGGGCAAGATACACGCGAAACACCACTTACGTCAAACGATTCAACACCCGTGAAACTGTTGATGCAAAAACTGAATGCGAACAGATAGACCAGAACGAAAAGAGCTGTTGTCCTGACCCCAAATCTCATGTTCTGAACCCCAAAATGCATTTGTCAGACAGATCTAAAAAGGACAGACCCAACTGGACTAGACGATTGCCTGAGAAATTGTCTGATTATGTCATGAACTGGAAGGAATAACTGCTATAGATGTAGGCTGTTCAACCACAGAAAAGGGGGGAAATATCAACTAAATAACTGGCCTACATGTTTGGATGTTTTCACAAAATATCGTTTGTTAGTATGTTTATTGTGGAAAAGGAAATATTATTAATTATAAGTGGTTGAAGAAGTTTATGAGATGTTCTTTGAGTAATTATATAAGTTAGTTTTGGACATGTTCAGTTGATTAATTAATGTAATTTTGCATCCAAGAAAAGGGGGGATGTTATGTATCAGGATTACTGGGGTTGTTTCCAGTATTGGTCACTAGAGGGCGCTGTTACTTGTAAAGAAGTTGATGTAAAACTCTTCAGTAAAACAGAGTGGAAGCCACAAGTCGTGTGTGTTGGTGTGTTCATTTAA

Function

NR:

description
pol gene product {Gypsy/Ty3-class retrotransposon Cpr1}

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_00095230_00102190.mRNA True 2928 mRNA 0.43 5 95230 102574

Neighbor

gene id symbol gene type direction distance location
CI01000350_00048651_00049682 NA coding upstream 44764 48443 ~ 50466 (+)
CI01000350_00014076_00015551 NA coding upstream 79316 14076 ~ 15914 (+)
CI01000350_00110973_00120683 NA coding downstream 6324 108898 ~ 120683 (+)
CI01000350_00133984_00139525 CLDN10B coding downstream 31410 133984 ~ 139964 (+)
CI01000350_00140280_00143769 NA coding downstream 37579 140153 ~ 143804 (+)
CI01000350_00146107_00147209 NA coding downstream 43342 145916 ~ 147275 (+)
CI01000350_00249103_00250406 NA coding downstream 146529 249103 ~ 250628 (+)
G506678 NA non-coding downstream 22908 125482 ~ 125723 (+)
G506679 NA non-coding downstream 47700 150274 ~ 150659 (+)
G506655 NA non-coding downstream 60065 162639 ~ 166302 (+)
G506680 NA non-coding downstream 75216 177790 ~ 181043 (+)
G506686 NA non-coding downstream 81079 183653 ~ 183956 (+)
G506786 NA other downstream 396522 499096 ~ 500756 (+)
G506911 NA other downstream 662736 765310 ~ 766111 (+)
G506858 NA other downstream 875517 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1351989 1454563 ~ 1462490 (+)
G507699 NA other downstream 1413135 1515709 ~ 1519828 (+)

Expression


Co-expression Network