CI01000350_00133984_00139525 (CLDN10B)


Basic Information

Item Value
gene id CI01000350_00133984_00139525
gene name CLDN10B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 133984 ~ 139964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_00133984_00139525.mRNA
ATGAGTAGCATGGCAAGAGAGATCCTGGCGTTTATACTCACTACGTCGGGCTGGGTGCTGGTGTCCTCCACTTTACCTACAGACTACTGGAAGGTGTCTTCAATCGACGGCACAGTTATCACCACAGCCACCTTCTGGTCCAACCTGTGGAAAACTTGTGTGACTGATTCTACTGGAGTGTCCAACTGCAAAGACTTCCCTTCAATGCTGGCACTGGACGGTTATATCCAGGTGTGTCGAGGTCTGATGATCGCTGCCGTCTGTCTTGGTTTCTTTGGATCTATCTTTGCTCTGATCGGCATGAAGTGCACTAAGATCGGTGGTCTTGATGAAACCAAAGCCAGAATCGTCTCCTTTGCAGGGCTCAACTTTGTTTGTCTTGGTCTGTGCTCTCTGACCGCCTGCTCCCTCTACGCTCACAGGATCACCTCTGAGTTTTTCGATCCTATGTTTGTTGCGCAAAAGTATGAACTGGGCGCCGCGTTGTTCATCGGCTGGGCGGGATCGACGCTGTGTATCCTCGGAGGAGCGCTGTTCTGCCTCTCGCTGTCTGAAGGCATGAGCAGCAGCAGTTCGCCGTATCCGTCGGACAGAAGGGCTTTTGTCAACAGCGGAGTCTCTGTAATGTCCCGTGCGGCACCACGGAGTCAGTCGTCACACGCGAGGAGACCTCTGCCAGAATACACCAGCCCTTCACAACAATTCGACAAGAACGCCTACGTGTAACACAGTGCTGAAGTATGGTGTAATATCTCGTTGGGTTTTGTCGCTCTTTTAGTGCCTTGGGATGGCCAGCACATGTTGTGTATCAGATTTGGTCAGGATTATTATTTGCCTCCTACTGTGATTTCAGCAGCATGTTTATGTTTACGCAGCACTGCATGAGATCATGTCATCTGTTGATAGTTGTGTTGTGCTCCACCATTTCGGGTGATTATTCATTTCTGGCAGTATGTGGTGTTGATCAGTACATCAGTCCCGGTCCAAAGCAGGACAAACAGAATCAGGTTTCAGGAGACTGTCGAATGAAATTACATTTCAACACAGATTTGAGTTTCAATATTATTTGAATTTCTAACTTCAAAGATTGTATTGCCTGTTTTGCCAAGCCTCAAAAATGAATGTGATTAAGAATGTTTTTTGTTCTTGTTGTTGTTGATGTTTA

Function

symbol description
cldn10b Predicted to enable structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to be located in cell junction and membrane. Predicted to be integral component of membrane. Predicted to be active in bicellular tight junction and plasma membrane. Is expressed in kidney; spleen; and testis. Orthologous to human CLDN10 (claudin 10).

NR:

description
Zgc:110625

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06087 CLDN; claudin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_00133984_00139525.mRNA True 1165 mRNA 0.47 5 133984 139964

Neighbor

gene id symbol gene type direction distance location
CI01000350_00110973_00120683 NA coding upstream 13301 108898 ~ 120683 (+)
CI01000350_00095230_00102190 NA coding upstream 31410 95230 ~ 102574 (+)
CI01000350_00048651_00049682 NA coding upstream 83518 48443 ~ 50466 (+)
CI01000350_00014076_00015551 NA coding upstream 118070 14076 ~ 15914 (+)
CI01000350_00140280_00143769 NA coding downstream 189 140153 ~ 143804 (+)
CI01000350_00146107_00147209 NA coding downstream 5952 145916 ~ 147275 (+)
CI01000350_00249103_00250406 NA coding downstream 109139 249103 ~ 250628 (+)
CI01000350_00260761_00261744 NA coding downstream 120665 260629 ~ 261809 (+)
CI01000350_00266537_00276376 NA coding downstream 125308 265272 ~ 276791 (+)
G506678 NA non-coding upstream 8261 125482 ~ 125723 (+)
G506679 NA non-coding downstream 10310 150274 ~ 150659 (+)
G506655 NA non-coding downstream 22675 162639 ~ 166302 (+)
G506680 NA non-coding downstream 37826 177790 ~ 181043 (+)
G506686 NA non-coding downstream 43689 183653 ~ 183956 (+)
G506688 NA non-coding downstream 47044 187008 ~ 187218 (+)
G506786 NA other downstream 359132 499096 ~ 500756 (+)
G506911 NA other downstream 625346 765310 ~ 766111 (+)
G506858 NA other downstream 838127 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1314599 1454563 ~ 1462490 (+)
G507699 NA other downstream 1375745 1515709 ~ 1519828 (+)

Expression


Co-expression Network