CI01000350_00266537_00276376


Basic Information

Item Value
gene id CI01000350_00266537_00276376
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 265272 ~ 276791 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_00266537_00276376.mRNA
GTATATATACAAGTTTGCATGTATTTTTCATCACATTTCATATAAACAGTACACACACACACACACACACACAGCAGCAGCATCATATTTATACATCTGGGAATTATACATCTGAATATATACTCAGCCCGCTGCTTTTTACCCTGTTGACCCATGATTGTGTACCTAATCACGATACGACAGTAGTGGGCCTCATCACTAACAACAATGAATCCAACTACAGGACTGAAGTGAGCCGACTGGTCCGGTGGTGTAATGACAACAATCTCTTCCTCAATGTGGCAAAGACCAAAGAACTTATCATCAACTTCAGATGATTAAAGAAATTAAGCCGGCTTTACTGACAAAACAAAATAAACAATAAAATCAACCAAACAACCAACATACAATTGTCAAAAGAGAGTGTACCACTTCCTCTAAGATAAATGTCTGCTAAAGTTGGTTACATTCTCAAGTTTTCAGTCCTGTTGTGTGTGGAATGTCATTTAAATCGTCTTTCCCTCTTGTTGAGGAAATCAAGAGAGTTCAGTCCTTATTAAAACAAATCCAAGTCAACAGTAATCCTACACTCTGGTTGAGAACGTAAATGAATCTCTCTTCCTTCTTGTCTTTGTTCTTTCTTTAGGTTCTTTCATGTGTTTCACTCACCATCTCAATAACTGAAGAAATCCAGTGATGCATCAGTAAGGGAAGAAAAAAATACACATATACTATATACACACATTTTCATCATATATAATGTTGTATATTATTTAGATGTGCAGATCTGAATCTTGTTTACTGCAGTGCATGCCTCATGTAGAAGGTAAATGTCTCATCTTGAATAAAGACAGAACATGCAGGAGAGTTCATGAAGATTCATTTAATTATAGGATGAACCGGGCAACACCTGACCCACAGAGCTGGTCGTACTTTATTCTCGTTTTGTGATGATTTTGTCATCAGTGTAACAGGTATAGAAATTACACTGTTAAATATATGTTCTGTTGAGAAGAATTCACACAAAACTGTTCATTTATATGTCTTATGTGGTTACCTGATCAAAATGAGTGCTTCTCCTTTAAGTGTTGTGTGTTCACAAGATGACTTCACTTCCTGTTCTGTCTCCTCCTCTTCCCTTTTATATTGTAACCTAATGGGAGAGGTAGGTTTCTTTTGATTTCCTGATAATCATTTAATTTAATATAATTAATTTTAAAACTGGGCGGAACCAATAGCGCTTAAATGCCCTGTTCCGGCCGGACTCCAATTTTCGTGACACCAGGATGCGGCCGCAGCAGACCATGTTGAAAGATCGCCACACGTCAACGAGGACGGGTGTTGATAAATGGCAGTGGTCTTCAGGTGATTCTGTGCTCTATCTGAACTGGGCTCCTGGACAACCTGAAGGCACAGATGAGTGTGCTATGATGAGAAATGGACAGTGGGGAGATTTGCCATGCAGTAACAACCTGACTTTCATCTGCGATTCATCTAACAACACGAACAGAGGACTCGTCTTTATCAATCAGACGATGAATTGGAGAGATGCTCAGAGATACTGCAGACAGAATCACACTGATCTGGTCAGTGTGAGGAACCAGATTGAGAGTCAACAGATTCAGAAGTTCATCAATGATAGTCTCATATCTGGTGATGTCTGGATCGGTCTGTTCAGAGACTCATGGCAGTGGTCAGATCAGAGTAACTCCTCATTCAGATACTGGTATCCTAATCAACCTAATAATAATAGAGGTCAAGAAAACTGTACAATTCTCGAACACGACACTCTTAAGCGATGGGGTGACAACACTTGCAACAGCCAATTACCTTTTGTGTGTCATGAAGATAAACTGATCCTGATCAAAGAGAATCTGACGTGGCCTGAAGCTCTGAGATACTGCAGACAGAATCATATGGATCTGGTCTCGGTTCATTCAGAAGAGATGCAGCGTCGTGTGATGAATGTGGTTAAACGGGCGTCTACTGAGGCGGTGTGGTTGGGTTTACACAACTGCTGCAGCCTGAACATGTGGATCTGGGTCAGCGGAGACATCGTGTACTATCAGAACTGGGCTCCATGGAACGGAACGACACCGGAAGAGTGCCGCCTCGAGAAGAGAAAAGGAGCAGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAAACTCGCAAACTCAACTTCATCTGCAGAAACGATGAGTGAATGTTTGTGTGTTTACTTACATTCACTGTTTTCATACTTCATTATTTCTCTTATTTACTTGTATTTGTTTTAGTAAGTCCTGAGTGAATCTGCTAACTGCTACATTTTTATCATAATATTTAAAAAAAAAAAAAAAAAAAAAAAAATTAACATTAATGTTTAATATTCTTCAGATGTTAAGTGTGTTTTATAAATCTCTTTGTATATCTGGTGTGGTTACGTCTCTTTATGTTTTCACTAACAATAACTGGTTGAATGTGAATCTGTGAGCAGCAGCTCTTCAGAATAATATTGTTTGTGTCTCAGAATGAAATCTGGTTTATTCTTAGAAAAGCTGAAGTGAAGGTTGGGTATAAAACATCTTGTGTTTGATCAAAACCATCAGATAAACATGTGAAACAGAACATCAGCTCAA

Function

NR:

description
Si:ch211-282j17.1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_00266537_00276376.mRNA True 2607 mRNA 0.39 4 265272 276791

Neighbor

gene id symbol gene type direction distance location
CI01000350_00260761_00261744 NA coding upstream 3463 260629 ~ 261809 (+)
CI01000350_00249103_00250406 NA coding upstream 14644 249103 ~ 250628 (+)
CI01000350_00146107_00147209 NA coding upstream 117997 145916 ~ 147275 (+)
CI01000350_00140280_00143769 NA coding upstream 121468 140153 ~ 143804 (+)
CI01000350_00133984_00139525 CLDN10B coding upstream 125308 133984 ~ 139964 (+)
CI01000350_00277505_00278977 NA coding downstream 382 277173 ~ 279752 (+)
CI01000350_00299478_00304914 NA coding downstream 22471 299262 ~ 305567 (+)
CI01000350_00324715_00343520 MAP3K12 coding downstream 47924 324715 ~ 344278 (+)
CI01000350_00361432_00364007 NA coding downstream 84641 361432 ~ 364078 (+)
CI01000350_00457534_00503845 NA coding downstream 180266 457057 ~ 503965 (+)
G506699 NA non-coding upstream 34909 227019 ~ 230363 (+)
G506694 NA non-coding upstream 46578 218204 ~ 218694 (+)
G506690 NA non-coding upstream 59567 196725 ~ 205705 (+)
G506689 NA non-coding upstream 75387 189606 ~ 189885 (+)
G506752 NA non-coding downstream 97125 373916 ~ 374298 (+)
G506760 NA non-coding downstream 114920 391711 ~ 391925 (+)
G506775 NA non-coding downstream 198334 475125 ~ 562627 (+)
G506807 NA non-coding downstream 293485 570276 ~ 570843 (+)
G506804 NA non-coding downstream 294371 571162 ~ 571997 (+)
G506786 NA other downstream 222305 499096 ~ 500756 (+)
G506911 NA other downstream 488519 765310 ~ 766111 (+)
G506858 NA other downstream 701300 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1177772 1454563 ~ 1462490 (+)
G507699 NA other downstream 1238918 1515709 ~ 1519828 (+)

Expression


Co-expression Network