CI01000350_00324715_00343520 (MAP3K12)


Basic Information

Item Value
gene id CI01000350_00324715_00343520
gene name MAP3K12
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 324715 ~ 344278 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_00324715_00343520.mRNA
GTGTGTTGAAGAGCAGTGGTGCTCCGGAGAGAGTGGTGAGGGCCACTTTTCTGAAGGGGTTCAGCACCCCGCTCTCCGATCCCCCCTTCTGCCGGCCGGATTCGGAGGTGCCGGCGAGCACCCCAGACACCGAACTCACCCCGACCCAATGCGTCCTCCGAAACGTGCTCTCCATCGACCCCGTCGGAGGCGGCAGCGGCACTCACACCCACAGCAACAGCCCCACCCTGAGCGACGAGCCTACCAACTTCTCCAACAGTGTGCTGAAGCTGCAGGAGGGCGGAGCCGAGGGTGGCGCCGTGCGCAACCAGGCCGACAGCTTCCGGCTGCAGGCGGGCGGAGGGGGCTTTCTGGAAGGCTTGTTCGGATGCCTGAAGCCAGTGTGGACAATGATCGGGAAAGCCTACTCGACAGAGCACAAGCAGAGCCAGGAAGGTGAGTACGACAATCGGAGACAGCAGCGAGTCGTTTCGGATGGAGATAATCGAATGTCTCTTCCAGAATCCTGGGAGGTGCCTTTCGAGGAGATCTCCGAGCTGCAGTGGGTGGGCAGTGGGGCACAGGGGGCGGTCTTTCTGGGCAAGTTTCATGGTGAAGACGTGGCTGTGAAGAAAGTGAGGGACATCAAGGAGACTGAGATCAAACATCTGCGCAAGCTCAAACACCCCAACATCATTACCTTCAAGGGCGTGTGCACGCAGGCTCCGTGTTACTGCATCCTCATGGAGTACTGCGCGCAGGGGCAGCTCTACGAGGTCCTGAGGGCCGGCAGGAAGATCACTCCGTCCCTGCTGGTGGACTGGGCCATGGGCATCGCCGGCGGCATGAACTACCTCCACCTGCACAAGATCATCCACAGAGATCTCAAGTCACCCAATATGCTGATCACACACGACGACCTGGTGAAGATCTCGGACTTCGGCACGTCTAAGGAGCTCAGAGACAAGAGCACCAAGATGTCATTTGCCGGCACTGTGGCCTGGATGGCGCCGGAGGTGATCCGCAATGAACCCGTGTCTGAGAAAGTGGACATCTGGTCATTCGGTGTGGTCCTGTGGGAGATGCTGACCGGTGAGATCCCCTATAAAGACGTGGACTCCTCCGCCATCATATGGGGCGTGGGAAACAACAGCCTGCAGCTTCCTCTTCCTGACAGCTGCCCGGACGGCTTTAAGATCCTGCTCCGACAGTGCTGGAACTGCAAACCCAGGAACAGGCCGTCGTTCAGGCAGATTCTGCTGCATTTGGACATCGCCTCTGCAGACGTGCTCTCCACCCCGCAGGAGACGTACTTCAAATCACAGGCGGAGTGGCGTGAGGAGGTGAAGCAGCACTTTGAGAAGATTAAGTCGGAGGGCACGTGTCTGCACCGTCTGGATGAAGAGCTGATTAACCGGCGACGGGAGGAACTCAGGCACGCGCTGGACATCAGAGAACACTACGAGAGAAAGCTGGAGCGAGCCAATAATCTCTACATGGAGCTCAACGCCGTCATGCTGCAGCTGGAGCTCAAAGAGAAAGAGCTGCTCAGGAGGGAACAGTGTCTGGATAAGAAATATCCTGGTCTGTTCAAACACCACCCCTCGACCACAGTGGACAAACTCATCAAGAAGAGAAGCGTCCCTCAGAAACTGCCGTCTCACGGCAAGAGGCCTGATCTCCTGAGATCAGAGATCATTCTCCCCAAGATGGACGCTGGTGTGCTGCAGGTGACTGTCCCGCCATGTTCAAACCGAGGACCTACCTCACCTAGTCGGGCCCGCAGGGTGAAAACCCGTCATCGGAGGAGTGGCAGAGGAAGCAGCGGGGATCTCTCAGGGCCTAAGCACCCTTCTGCCCCTGCTAGCCAAGAAAGAAAGCCCACGCTGTCCAACACGACGACGCCCGCTGCGCCCCTCACTGAAACGGCTTCAGGGGGCACCATGAGGGAGGGCCAACTGGAGCCGCCCCCGCTGAAGCTGTCCTCGTCCAGCCCGGATCTGCTGTGCTCCACCCGCCACGTTGAAGATGGAGTCAGTGGAGCCACCACGACTGAAGCCCTGGGCAGAGAGACCAGTGGCGGGGCAGAAGCTGGGGCCGGTCTGGACGAGACTCCACCCAGAAGTGACACGGCCAGTGAGGATGCCGCTTCACTGCCGTTCTCCAGCAGCCCTGATTCGCCCTGCTGTGGCAGAAGTGGAGCGGTGGGCAGAACCCATGCAGAGGAGAGAGAGGAGGGAACTGGTGCGGTGCGATTGCCCAGAGGATCCAGCGGAAGTCATCTGACTCCATCGGCCATATTGTATCGAGCTGCTATCACTCGCAAACAGCGACGTGGCGTTTCCTCTGAAGAAGAAGAGGGTGAAGTGGACAGCGAGGTGGAGTTACCAAGAAGACGACGGCCGACCAGTATAACCAAGTGCCAATCAGTATCCACTTTCAGCTCAGAGAACCTGTCCGTGTCAGAGGGAGAGGAGGGCCACACCACTGACCACTCCCACAGCGGCACGCCAGATGTGGTCAGTACCAACACAGACGAACGTCTGGACGACCGCAGCGATGACCTCATCTCCCAAGGGTCTGAGATCCCTGTGGATATTACAGACCCCACTCTGTCTGAAAGAGAGGCTGCCGCCCTCGAACAGGAGAGGGCGAATTTTGACTTGGAACAAAATATCCTGGAGACTCGCGCATTATGTGAGGACTCGGACTGTGACAGCGCTGAACTTGACCAATCAGGGAGCGGAGAGCCGAGCCGTCCCCCGAGTGCAGGAGGCTGGGGCCAGGGGCCCCAAAACTGAAACACACACACACACACACACACATGTGAACCCGTGCAATCAAGCACACACAGGCATCACACCAGCACACACTTTCACTTTTGGTTGCACCAAAGCGAAACTGATTTTCGTGAAACACGTGTGCGCACACATCATCTGAGAAATGCAGCGATACAACAGTAAACACAAAACAACTAGCCACCTAAAGAACAAATACACTGACACACTGGTCATAACAACTTTGGGATCGCAAACTGCCTCATGACCAGGACGTAGCCACGGAAAATATAGGAAGACAAGTAGTGCAGCAAACCGCTGCTAGAGACGAGGATTGCAGGAACTATGTGAAAAGATCAATGCAATTAAAAACTTCAGGGCATTCCCAAAAAGCAGCAATGATGCTTTCGTTAAGTTTGCGCTATTGTCGCGCAGATAGACTTCCTGGTGCTACGAGAGTGCCGGAATAATGTCCGTTAATGTGTGGAAGGCTTGTGGTTAGCAGTACGGTTTGAAGTCAAAGAGTCTAGAACGAATCTGAATGTGTAGAGCCGGATGAAATCTTCCTCCTTCGGCCTGGATGAAGTAGTTTTGCCAAAACTGTACCCCAATAATCTGTTCAGACATGACGTAAATGAAGTGTGTTGCTCTCGGATTGGGACTGACTTCACTACTATGTACAGATGCTTCCTTTCCAAAGCATTTACAAGGTGCATATACAAATGTGATACTATAATGCCCTGAATTTATGTAAATATATATTTAGTAAGTTAAGTCTAAGA

Function

symbol description
map3k12 Predicted to enable JUN kinase kinase kinase activity. Predicted to act upstream of or within JNK cascade and protein autophosphorylation. Is expressed in central nervous system; cranial ganglion; neural tube; neurons; and retina. Orthologous to human MAP3K12 (mitogen-activated protein kinase kinase kinase 12).

GO:

id name namespace
GO:0000186 activation of MAPKK activity biological_process

KEGG:

id description
K04423 MAP3K12, MUK; mitogen-activated protein kinase kinase kinase 12

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_00324715_00343520.mRNA True 3538 mRNA 0.55 13 324715 344278

Neighbor

gene id symbol gene type direction distance location
CI01000350_00299478_00304914 NA coding upstream 19148 299262 ~ 305567 (+)
CI01000350_00277505_00278977 NA coding upstream 44963 277173 ~ 279752 (+)
CI01000350_00266537_00276376 NA coding upstream 47924 265272 ~ 276791 (+)
CI01000350_00260761_00261744 NA coding upstream 62906 260629 ~ 261809 (+)
CI01000350_00249103_00250406 NA coding upstream 74087 249103 ~ 250628 (+)
CI01000350_00361432_00364007 NA coding downstream 17154 361432 ~ 364078 (+)
CI01000350_00457534_00503845 NA coding downstream 112779 457057 ~ 503965 (+)
CI01000350_00586494_00587461 NA coding downstream 242216 586494 ~ 587683 (+)
CI01000350_00825304_00827619 NA coding downstream 481026 825304 ~ 827675 (+)
CI01000350_00856394_00860868 NA coding downstream 512116 856394 ~ 861076 (+)
G506699 NA non-coding upstream 94352 227019 ~ 230363 (+)
G506694 NA non-coding upstream 106021 218204 ~ 218694 (+)
G506690 NA non-coding upstream 119010 196725 ~ 205705 (+)
G506689 NA non-coding upstream 134830 189606 ~ 189885 (+)
G506752 NA non-coding downstream 29638 373916 ~ 374298 (+)
G506760 NA non-coding downstream 47433 391711 ~ 391925 (+)
G506775 NA non-coding downstream 130847 475125 ~ 562627 (+)
G506807 NA non-coding downstream 225998 570276 ~ 570843 (+)
G506804 NA non-coding downstream 226884 571162 ~ 571997 (+)
G506786 NA other downstream 154818 499096 ~ 500756 (+)
G506911 NA other downstream 421032 765310 ~ 766111 (+)
G506858 NA other downstream 633813 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1110285 1454563 ~ 1462490 (+)
G507699 NA other downstream 1171431 1515709 ~ 1519828 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036845 map3k12 coding NC_007120.7 CM002893.2 219124 ~ 235602 (+)
bowfin (Amia calva) AMCG00008759 NA coding CM030126.1 CM030126.1 10997570 ~ 11017498 (+)