CI01000350_00457534_00503845


Basic Information

Item Value
gene id CI01000350_00457534_00503845
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 457057 ~ 503965 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_00457534_00503845.mRNA
TTATAAATAGGAAGTCTGTCAAATAATTACAGGTAGCCACACTTTTGACTTAAAAGTAGGAAAAAGTGCTTCATAGAGCATCACTGCAGAATTACTGAAATTTTGACGGCACATTCAGAAATAAACATGTAAGTATTTAGCACATTCCTACATTTCAGTACAAATTGTTTTCAGACAGTGTATATGTTGTTTTGTATTTACACTTGTTTATAGCATAAACCTCTTAAATTAAAGAGTAAGTTAAAAGTGAATAAAAATCTGCCAGTGAAACATGTATCGTTTACATTTATGTCTTAATATTTAATGCAGCTCACTTCAACTTTATGTTTAATATTTTTTATTATCATAAAACAAGCCTAAGATAATGATTAAATATATTTATTTCAAATAGCTTTGTACTTATTTGGTATCTTTAACATTTTCTTATAATGCACAGGCATATATTACCTTTGCTGTGTATTCATTCCCAGGTTTACCATGGAAAAGCTGACACTTCTGCTTCTTTTCATGACATTCTCTGCGGGGGATGCAGCAGCTAATGGCTGCCCCCCTGGATGGTCAGCATTTGGACTGAAATGTGTCAAATTCTTCTCACAAACACTTGACTGGTTGTCAGCAGAGAAGTACTGTCAAACTTTTGGTGGAAATCTTGCATCGGTGCACAGTAAATCTGAAAATGATCTTCTGCTGAGCATGGTGCCTGGTACGACACGAGCTTATATTGGTGGTCATGATGCTGTAAAAGTAGGACAGTGGATGTGGAGTGATGGCTCTGCATTTGATTACAACAACTGGTGCAGTGGACAACCTGACAATCATGCAAATGTTGAGAACACTCTGGAAATAAACTTTGCACTGGGTAGTCTCACAACACTTTCTCTCATCCACTTGAAAGGCATATTACATCACATGACACACACATATAACGACTCTGTTGGAAAAAAAAAGTACTGTCAAACTTTTGGTGGAAATCTTGCATCGGTGCACAGTAAATCTGAAAACAGTCTTCTGCTGAACATGGTGCCTGGTACGACACAAACTTGGATTGGTGGTCATGATGGTGTAAAAGAAGGAGCTAGCCTATCCACACTTCTTGAGCGAGCTGATGCAAGACAGCCCTTTCTCCTCTGCATTCCTTCTACTTCACAAAGCATTGTTCCTGACTATCAACTTTCATCTATGTATGGTTCAGTTGTTGCACACCTACAGGCTTCAGCACTGAACACAGAGGCAAAGAGGTACAAGTTTTTTGAAGAAAAATGGGAAATAGTTGAGCCTGTGGAATATGTCCTTGGTGTGAGTGATGATTTAAAGACTTATGGTTTTGATAAGAAACTGAAGCCTCTTATTGTTGATTTGAAAATTTTGGAAACTGAAGGCACTCTGTAATACTCTGTATTGGTTCTGTAATACAAGTCACAGGAGATAATCTTGCTTTAAATGGTTTATTGGGGTTTGTTGAATCTTTCAGTGAAACGCATTTCTGTAGGTTTTGCTTGGTTAGTAAGA

Function

NR:

description
Si:dkey-241l7.4 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_00457534_00503845.mRNA True 1509 mRNA 0.37 9 457057 503965

Neighbor

gene id symbol gene type direction distance location
CI01000350_00361432_00364007 NA coding upstream 92979 361432 ~ 364078 (+)
CI01000350_00324715_00343520 MAP3K12 coding upstream 112779 324715 ~ 344278 (+)
CI01000350_00299478_00304914 NA coding upstream 151490 299262 ~ 305567 (+)
CI01000350_00277505_00278977 NA coding upstream 177305 277173 ~ 279752 (+)
CI01000350_00266537_00276376 NA coding upstream 180266 265272 ~ 276791 (+)
CI01000350_00586494_00587461 NA coding downstream 82529 586494 ~ 587683 (+)
CI01000350_00825304_00827619 NA coding downstream 321339 825304 ~ 827675 (+)
CI01000350_00856394_00860868 NA coding downstream 352429 856394 ~ 861076 (+)
CI01000350_00887155_00896486 NA coding downstream 383152 887117 ~ 898009 (+)
CI01000350_01039300_01048692 NA coding downstream 534188 1038153 ~ 1048845 (+)
G506760 NA non-coding upstream 65132 391711 ~ 391925 (+)
G506752 NA non-coding upstream 82759 373916 ~ 374298 (+)
G506704 NA non-coding upstream 107903 242446 ~ 349154 (+)
CI01000350_00260761_00261744 NA non-coding upstream 196184 260629 ~ 261809 (+)
G506699 NA non-coding upstream 226694 227019 ~ 230363 (+)
G506807 NA non-coding downstream 66311 570276 ~ 570843 (+)
G506804 NA non-coding downstream 67197 571162 ~ 571997 (+)
G506805 NA non-coding downstream 68187 572152 ~ 572617 (+)
G506855 NA non-coding downstream 190086 694051 ~ 694882 (+)
G506867 NA non-coding downstream 201954 705919 ~ 707274 (+)
G506911 NA other downstream 261345 765310 ~ 766111 (+)
G506858 NA other downstream 474126 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 950598 1454563 ~ 1462490 (+)
G507699 NA other downstream 1011744 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1883658 2387560 ~ 2388902 (+)

Expression


Co-expression Network