CI01000350_01110658_01123802


Basic Information

Item Value
gene id CI01000350_01110658_01123802
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1110658 ~ 1124225 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_01110658_01123802.mRNA
GAAAATGTTGAAAACTATGCTGAAGACTCCAGCATCCCATCAAACTTCTCCCCTGAAAGAAAAGAGGCTATGGTGTTGGTGTGGAAGAGGACGTGGCAAGACCAGGAAGATTCTGGGGTGAATTCCCTGATTCTGGAGGATGATTACCCACATTGCTTGGCTTTGTCTCCATACACACAAACGATTTCTTACTGTACCTCAAAAAAATATACTGTGGAGAATGAAAGCTGCACCGGAGGCAATGAAATATTGAATGACGTGGACCATCTATCTTCCACTAATCGATCTGGACCCAGTGCTTTGATCCTGCTTGGACAGTTCATCATGAAACAGAGCTATATAATTGCTCTCATCATCACGATGGTATGGAGCATCAGCTATAACTCATGGCTTACGTTAATATTACTGGTGTGGTCATGTGTGATCTGGATGTTGAAGGATCGGCGACGGTTCGCTATGCTTAGTGCTCCATTTCTTGCTGTCTATGGGACATTGCTGCTAGTGGTTACATTCATCAGTCAACTCCATCTTAACCATATTGACATTTTCCCTACTTTACCGAAGCTTGTCTTGATTGACTTTGATGTCTATGGTTATCCAGTGCCTTGTGTGCATCTTGCTGCAAAGGTTGCTTATTCGTTTAGTTTCTGGATTTTACTTAGGCAACGGCTGAAAGAAAAAAACGAGGAGCTGCAGAGCACGGATGATTTAATGGAAGTCAAAGTTCAAGCATGTGACAACAGTCAAACCTCTCAAATGATGACTGTGTTGGGAGCATTAGTAAAAGGCATTTTGGTGAAGTACTGGATCTTCTGCTGTTGCTTCATGTTCTTCTTTGTCAGTTTCTCTGACAAAGTGGCAGTCTACAAAATTCTCTATATCTGCTTATTCCTTTTCTGTGTGGTTCTGTATGAGGACACACTTACTTTTTCAGAAAACACAGATATTTTTGAAAGGCCATCAAAGGAGAACAGTGCTCTTTAGAGCTCATCACGATGTAGTAATAACATCTACTAGCAGGAGCTAACCAGGGCTGCGTTTCCCAAAAGCATCATAAGCCTAAGTTGATCGTAAAAACGATCGTACAAGTGATCTTAATATTACGGTCTGTTTCCCAAAAGCATCATAACTTAAGTAGCTCTTGAAAATCATTGTAGATCTGCGAGTGCTCTGGAGTAATTGTAAACCCTTAAGTGTGTCATAAGAAGACAGAGTTATGAGGTCACCTGCAGAACAATCTGCAAATTACACCTTTAACTTTATTCAAGTGCAATGTGATTGTATTATAAGGTTTTGATTGTACTTTTTTGTACACTTTATTACTTTTTTTTTTTTTTAAATGAGGGCAGAAAACAAACAAAAAAATTGCAAATACACATCTAGATTAAATGACTGAACAAAAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_01110658_01123802.mRNA True 1407 mRNA 0.39 7 1110658 1124225

Neighbor

gene id symbol gene type direction distance location
CI01000350_01100195_01101995 NA coding upstream 8220 1100195 ~ 1102438 (+)
CI01000350_01068561_01071605 NA coding upstream 38879 1068411 ~ 1071779 (+)
CI01000350_01039300_01048692 NA coding upstream 61813 1038153 ~ 1048845 (+)
CI01000350_00887155_00896486 NA coding upstream 212649 887117 ~ 898009 (+)
CI01000350_00856394_00860868 NA coding upstream 249582 856394 ~ 861076 (+)
CI01000350_01136425_01169812 NA coding downstream 12200 1136425 ~ 1169812 (+)
CI01000350_01268618_01269611 NA coding downstream 144300 1268525 ~ 1269786 (+)
CI01000350_01271412_01272029 NA coding downstream 147187 1271412 ~ 1273291 (+)
CI01000350_01289098_01292899 NA coding downstream 164873 1289098 ~ 1293079 (+)
CI01000350_01315313_01317803 NA coding downstream 191044 1315269 ~ 1318223 (+)
G507024 NA non-coding upstream 47330 1062933 ~ 1063328 (+)
G506800 NA non-coding upstream 93636 1015972 ~ 1017022 (+)
G506813 NA non-coding upstream 105800 1004530 ~ 1004858 (+)
G506996 NA non-coding upstream 153748 956678 ~ 956910 (+)
G506964 NA non-coding upstream 229483 880344 ~ 881175 (+)
G507059 NA non-coding downstream 62926 1187151 ~ 1217232 (+)
G507078 NA non-coding downstream 65879 1190104 ~ 1253441 (+)
G507123 NA non-coding downstream 182073 1306298 ~ 1313026 (+)
G507125 NA non-coding downstream 183109 1307334 ~ 1307891 (+)
CI01000350_01343443_01355860 NA non-coding downstream 229195 1343102 ~ 1356215 (+)
G506858 NA other upstream 131767 978091 ~ 978891 (+)
G506911 NA other upstream 344547 765310 ~ 766111 (+)
G506786 NA other upstream 609902 499096 ~ 500756 (+)
CI01000350_01454880_01462490 NA other downstream 330338 1454563 ~ 1462490 (+)
G507699 NA other downstream 391484 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1263398 2387560 ~ 2388902 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037531 si:dkey-11f4.7 coding NC_007120.7 CM002893.2 396346 ~ 403767 (-)