CI01000350_01289098_01292899


Basic Information

Item Value
gene id CI01000350_01289098_01292899
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1289098 ~ 1293079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_01289098_01292899.mRNA
ATGTGGAGTGACCTACTAGCTGTAAAGAGTCACCCATGGTATATGCAGGTCTTAGCCACAGACAAACTGGAAAGACTGGTGGTATGGTGGTATTTAGATGACAAAGAAACATCACCACAAGCCTCCAGTGATTGGTCAAACATGGAAACTCAAGACCCTGATGTTGTTGAGGCAGTAAAGGCATCAGGCGAGTCCACTCTGGAAAAGGCTACAGCAAAAGCTAAAAAAGCATTGGATCAGCTGATAAATGTCTCACTAAACATCGCCGTGACTGGAAAAACAGGATCTGGGAAATCCTCCTTTGTAAATGCATTAAGAGGTCTAGGTGAAAATGATGCTGGAGCAGCGCCTACTGGAGTCACAGAAACTACAATGAAGGCCACCATGTATGAGCATCCTGGAATGCAAAATGTGAAGATCTGGGACCTGCCTGGAATTGGAAGTCCAAAATTCAAAGCAAAAAAATACCTTGAAGATGTCAAATTTAACACTTATGATTTCTTCATTATCCTTAACTCAGAGAGGTTCATGCAGGATGACATCATGCTGGCTAAAGAAATTAAAAAACAAAAAAAACTCTTTTACTTTGTTCGTTCCAAGATTGACAATGACATCAGAGCAGAGGAAAGAAAAGAGGGATTTGATGAGCAGAAAGTCCTTTCCATTATAAAAGAGGACTGTCAAAAAAACCTGAAAGAAATGGGAGACCCCAAAGTTTTCTTGATATCATCTTTTGATTTGGAGAAATATGATTTTGAAACACTTCAAAACACACTAGCAGAAGAGCTTCCAGAACATAAGAGATTCGCTCTTCTACAGGCCTGGCCAGTGTGCTCCACTGAATGTCTTGAGAAGAAGATCAAGATGTTTGAAAACATGATCTGGGCTGCATCTTTTGCCTCTGCTGGTATAGCAGTGGTCCCTGTGCCTGGTCTATCAGCAGCATGTGATGCAGGCATAGTGATACTTTTTCTCACAATGTGTTACTATTCATTTGGTTTGGATGAAGGATCACTGACAAGGCTTTCAGAAAAAGTGAACAAGCCCCACCTGAAATAAATGGCCAAATCAAAGTTTGTTGTTGCCATCCGAGAAAAAGCTATGAACAGATTGCAAGTCTCTGCTGCACTCGCTACCATTGCTACTGTCGAATATTTTATTAGTCTCGTTCCAGGTGTGGGCAGTGTTGCTGCTGCGGGAATATCCTTCGCTACTACTCGGTATTTGTTGAAAGAAGGA

Function

NR:

description
interferon-inducible GTPase_a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_01289098_01292899.mRNA True 1239 mRNA 0.42 3 1289098 1293079

Neighbor

gene id symbol gene type direction distance location
CI01000350_01271412_01272029 NA coding upstream 15807 1271412 ~ 1273291 (+)
CI01000350_01268618_01269611 NA coding upstream 19312 1268525 ~ 1269786 (+)
CI01000350_01136425_01169812 NA coding upstream 119286 1136425 ~ 1169812 (+)
CI01000350_01110658_01123802 NA coding upstream 164873 1110658 ~ 1124225 (+)
CI01000350_01100195_01101995 NA coding upstream 186660 1100195 ~ 1102438 (+)
CI01000350_01315313_01317803 NA coding downstream 22190 1315269 ~ 1318223 (+)
CI01000350_01343443_01355860 NA coding downstream 50023 1343102 ~ 1356215 (+)
CI01000350_01357162_01358608 NA coding downstream 63281 1356360 ~ 1358646 (+)
CI01000350_01374131_01407038 NA coding downstream 80718 1373797 ~ 1407038 (+)
CI01000350_01454880_01462490 NA coding downstream 161801 1454563 ~ 1462490 (+)
G507078 NA non-coding upstream 35657 1190104 ~ 1253441 (+)
G507059 NA non-coding upstream 71866 1187151 ~ 1217232 (+)
G507024 NA non-coding upstream 225770 1062933 ~ 1063328 (+)
G506800 NA non-coding upstream 272076 1015972 ~ 1017022 (+)
G506813 NA non-coding upstream 284240 1004530 ~ 1004858 (+)
G507123 NA non-coding downstream 13219 1306298 ~ 1313026 (+)
G507125 NA non-coding downstream 14255 1307334 ~ 1307891 (+)
G507656 NA non-coding downstream 107206 1400285 ~ 1400530 (+)
G507672 NA non-coding downstream 134963 1428042 ~ 1428260 (+)
G506858 NA other upstream 310207 978091 ~ 978891 (+)
G506911 NA other upstream 522987 765310 ~ 766111 (+)
G506786 NA other upstream 788342 499096 ~ 500756 (+)
G507699 NA other downstream 222630 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1094544 2387560 ~ 2388902 (+)

Expression


Co-expression Network