CI01000350_01315313_01317803


Basic Information

Item Value
gene id CI01000350_01315313_01317803
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1315269 ~ 1318223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_01315313_01317803.mRNA
CTATATATAGCTACCCATGTCATCAACATCTGCTGATATTGGAGATGGATGAGGCAACATTTACTACTCTTTTTGAATTCAAAAAATCTGGAAAGCTACCTCATGGTCTTTCCAGGAATGAAAAAATTGTGTTTCTCAGAAAAGCCAAAAACTTCATAATTGAAAATGAAGTTTTGCATTACATAAAGAAAAAAGCAGGAGCTCTGTCAAAAGTCATTCAAAGCAAAGAGAAGGCCAAAGACATATTTAGGGAATTCCACAGTAGCTCAATAGGTGCCCACTGTGGGGTTCATAAAACTCTTGATGCCATAAGCAAGAGGTTTTACTGGCCAGGCATGTCTGTGGATATTAAAAAATGGGCAACACACTGTGAAGTTTGCCAGAGGAAAAATAGTTCTCTTAAGACTCAAACTGATTACACCCCTATTGTGGTGGCAGAGCCATGGGAGGTAGTGGGAATGGATTTAGTGGGAAAACTTGCACCAACAAAAGATGGCTACCAATACATATGTGTTATGGTAGACTATTTTACAAAGTGGTGTGAGGCTTTCCCACTAAAATCCAAAAAGGCGGAGGAGGTAACAAATTGCATTGTCCGGCTCTTTTATAAATTTGGTGCTCCTAAAAGGATTTTAACGGACCAAGACACTGAATTTGTCAACAAGATAAATCTGGGCGTGTGTGAAATGCTTGGCATCAAGCGGAGTTTATGTGCTCCATACCATCCCCAAACAAATGGATTGGTGGAGAAACTTAATGGAACAATTCAAAGAACATTGAGCAAGCTTGTTGAGAAAAGACCAAATACATGGTCTGATTATTTGGATGCAGCAATGTTTGGTCTACGAACCAAAAAACAATTGACCACAAATTTCTCCCCATACTTTTTACTTTTTGGTCGTGAGGCTAGGTATCCATGTGAGGTACCACACGCATATGAGATCAATGAAAGCGTAGAAGACATGATTGCCTTAGAATCACTCATCAACCGGCGGGACAAGATTTACAAAATTGTTCAGGACAACATGACATGGGTTCAAACTAAAATAAAAAAAAGAAAACTACAACAAGGAAAGCCCAGTGTCATGCAGGTTGGGGACAGGGTAATCAGACAAAACATCAGGAGCCAGCAGAGAAAGGGTGGAAAACTAGATCCAGATTGGGTAGGCCCATTTACTGTAACAAAGGTAGATGGGAAAAGCATTGACCTTCTAGATGACAACGGAAAAACAATTCCCAGGACTACCTTCACAGTAACCCAAAGACACTACACTTGTCATCAAGCGCCTACTGCCATACCTGCCTCCCAACATACAGTCTCCAAGCCTGCTGCTTCCCACACTGCTGCGTCCAGTGCTGCCTCTAAGCCTGCTGCCTCCCACACTGCTGCCTCCCAGACTACTTTGTTACAAGACATCTGGGCAAGCAAAGTAGGAGGAAGGCTCTGTAGCAAAATAGGTCCCTATAAATTGTTTACCTTTGATCTTGAGCGCCTCAGGCCTGGGCAGATGCTTGAGAGTGAGGTTATCAATGCATACCTCACTTGCCTGGTATAACAGTTATGCAGGGAAGGCATTTGTCATGGATTCGTTTGAAATTACAAACATATGGGATGGCAAGGGCAGTTCAGTGACGAGGGTAAAAGACCATGCTCATCCTGAAGAAAAAACAAAAGTTTGTGTTCTTGAGATTGTGTTGTTCTAATTACCTATAACTGTATAATATAGATGGATCCACGGGCATATGATCTTCTGCTGGGGGCCGTAAATGAGGGCAAAAACCACTGGACACTGCTGGTTTGTTTCATTACATGACTTATGCCTTTCTCTATTAGTAGGTTGTTTGTTTGTTTTTCAGTTTAATAACTTAATCTTTTGGCAGATGATATATCCTCAAAAAGGGAGGATAGTTTATTTAAACTCGTTTGGTGAGAGCAGCAGGAATGTTGTTCACGGCAGAAAGGCTGTAAGGTGAGA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_01315313_01317803.mRNA True 1976 mRNA 0.41 10 1315269 1318223

Neighbor

gene id symbol gene type direction distance location
CI01000350_01289098_01292899 NA coding upstream 22190 1289098 ~ 1293079 (+)
CI01000350_01271412_01272029 NA coding upstream 41978 1271412 ~ 1273291 (+)
CI01000350_01268618_01269611 NA coding upstream 45483 1268525 ~ 1269786 (+)
CI01000350_01136425_01169812 NA coding upstream 145457 1136425 ~ 1169812 (+)
CI01000350_01110658_01123802 NA coding upstream 191044 1110658 ~ 1124225 (+)
CI01000350_01343443_01355860 NA coding downstream 24879 1343102 ~ 1356215 (+)
CI01000350_01357162_01358608 NA coding downstream 38137 1356360 ~ 1358646 (+)
CI01000350_01374131_01407038 NA coding downstream 55574 1373797 ~ 1407038 (+)
CI01000350_01454880_01462490 NA coding downstream 136657 1454563 ~ 1462490 (+)
CI01000350_01583582_01585575 NA coding downstream 265260 1583483 ~ 1585964 (+)
G507123 NA non-coding upstream 2243 1306298 ~ 1313026 (+)
G507125 NA non-coding upstream 7378 1307334 ~ 1307891 (+)
G507078 NA non-coding upstream 61828 1190104 ~ 1253441 (+)
G507059 NA non-coding upstream 98037 1187151 ~ 1217232 (+)
G507024 NA non-coding upstream 251941 1062933 ~ 1063328 (+)
G507656 NA non-coding downstream 82062 1400285 ~ 1400530 (+)
G507672 NA non-coding downstream 109819 1428042 ~ 1428260 (+)
G507673 NA non-coding downstream 110462 1428685 ~ 1429025 (+)
G506858 NA other upstream 336378 978091 ~ 978891 (+)
G506911 NA other upstream 549158 765310 ~ 766111 (+)
G506786 NA other upstream 814513 499096 ~ 500756 (+)
G507699 NA other downstream 197486 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1069400 2387560 ~ 2388902 (+)

Expression


Co-expression Network