CI01000350_01343443_01355860


Basic Information

Item Value
gene id CI01000350_01343443_01355860
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1343102 ~ 1356215 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000350_01343443_01355860.mRNA
CTACAAAAACCACAATAATATAGCCTATTTCAAAATCAAATGAAATACAATGTAAATTTTGATCTCTGACCTTTTCCAAAGGCGTCCTTGTCAAAAAGAATGCATACATGTAAATTAGTTATTTATCAGGCAATCAAAGGATTTTCATATGAATATGATTCTGAAAGACAATGTTTTCACACACTTTTCTGGAACAGAAAAAAAAAAAATCTATGACAAGCACAGATCTTTTTGTCCTCTTTAAATAGCCATAATTTCTCCTGTTCATATATTTCTTAATGAACTTGAATAAGATTAAATGAACATGCTTATTACAGGTGAAATCCAAAACTTTTCCTAGAATGGAAACTATCGAAGTCATCTCAACCGACAAAGCTACAGTTGTCATCCAAGTGAATCCACAGGCGGATCAAGACAGCACTGTTTTTGTTGATGGACAGAAGGCCAGAGGAACAAGTCACAATGTGGCCCTTAAAGTATTTTTCAAAGCACAACCAAAGGCATTAGGGACTGTCCAGATAATGATTGGAGTGGTGATCTTCTTTATTGGTATTATTTTCACCATCAGTTACCCTGCTATTGTTGTCTTCAGTGGAATAACCTACTGGGGATCTTTCATCAATGAATTTTATCATGCCCTGTGTTTCTCTCAGTACATCAGTGCTGGATCTCTGTCTGTTGCGGCACAGAATAAACTCAATCTGTGTGTGGGTTTGCGGATCGTTGTAATATTGCTGGTGTTCACCATTCCTCAGTTCATCATCTCCATCTGTATCTCAGGATTTGCCTGCAAAGCCACCTGCAACACAGACTCTACAGCGACTGTCCAGATAATGATTGGAGTGGTGATTTTCTTATTTGGTATTGTACGCACCAGCAACATCTACAATTACCTTTACCCAGCTATTTCTGTCATAAGTGGAATAACTTACTGGGGATCTTTCATTTACATCAGTGCTGGATCTCTGTCTGTTGCTGCTCAGAATAAACTTGATCTGTGTGTGGTGAAAGCTTCTCTTATAATGAATGTGATCGGTGCCATAACTGCAGGGATAGCCATTCTTCTGATGTCCATAGAAATAGTAGAGTTTTCCCATAGAAGGATCCCCAATGATCTGGGGACCAACGGAATATTGCTGCTGTTCTCCATCCTTCAGTTCATCATCTCCATCTGTATCTCAGGATTTGCCTGCAAAGCCACCTGCAACAGAGACTCTACAGTGGTCAATGTGGCACTAAACCAGATTGTTGAAGTGGGTGACAGAATACTGAGTCACAGTGAGAAGATCTTACCAAGGTTGCAAGGAATTAAAATCTCATATTGTTGCTTCCAAGCAAGTTCTCCAAAAATTGAGAATTGAAAGTACATCAAATGATGTGTATACA

Function

NR:

description
Membrane-spanning 4-domains, subfamily A, member 17A.1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000350_01343443_01355860.mRNA False 1386 mRNA 0.39 10 1343102 1355885

Neighbor

gene id symbol gene type direction distance location
CI01000350_01315313_01317803 NA coding upstream 24879 1315269 ~ 1318223 (+)
CI01000350_01289098_01292899 NA coding upstream 50023 1289098 ~ 1293079 (+)
CI01000350_01271412_01272029 NA coding upstream 69811 1271412 ~ 1273291 (+)
CI01000350_01268618_01269611 NA coding upstream 73316 1268525 ~ 1269786 (+)
CI01000350_01136425_01169812 NA coding upstream 173290 1136425 ~ 1169812 (+)
CI01000350_01357162_01358608 NA coding downstream 475 1356360 ~ 1358646 (+)
CI01000350_01374131_01407038 NA coding downstream 17912 1373797 ~ 1407038 (+)
CI01000350_01454880_01462490 NA coding downstream 98995 1454563 ~ 1462490 (+)
CI01000350_01583582_01585575 NA coding downstream 227598 1583483 ~ 1585964 (+)
CI01000350_01625265_01628425 DLX2A, DLX2 coding downstream 269258 1625143 ~ 1628624 (+)
G507123 NA non-coding upstream 30076 1306298 ~ 1313026 (+)
G507125 NA non-coding upstream 35211 1307334 ~ 1307891 (+)
G507078 NA non-coding upstream 89661 1190104 ~ 1253441 (+)
G507059 NA non-coding upstream 125870 1187151 ~ 1217232 (+)
G507024 NA non-coding upstream 279774 1062933 ~ 1063328 (+)
G507656 NA non-coding downstream 44400 1400285 ~ 1400530 (+)
G507672 NA non-coding downstream 72157 1428042 ~ 1428260 (+)
G507673 NA non-coding downstream 72800 1428685 ~ 1429025 (+)
G507700 NA non-coding downstream 139525 1495410 ~ 1558319 (+)
G506858 NA other upstream 364211 978091 ~ 978891 (+)
G506911 NA other upstream 576991 765310 ~ 766111 (+)
G506786 NA other upstream 842346 499096 ~ 500756 (+)
G507699 NA other downstream 159824 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1031738 2387560 ~ 2388902 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030224 ms4a17c.2 coding NC_007116.7 CM002889.2 33498253 ~ 33500331 (+)