XLOC_013838 (naxe)


Basic Information

Item Value
gene id XLOC_013838
gene name naxe
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 7408235 ~ 7412647 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027659
GCTGACGTTCACTAACCCGGATATTGTTTAAATACCGTGTTTCAGCTGCAGAGGGCTGCAAAGTGTCTTAtctaatatatttgtgcatggtTGGATCCTGTAAAAAGCTGTGGTTTCTGCTATATTTGTTCTTTTGAGCATATTGTTGGAGTTATTCAATGTTACTGAGCGTCTGATTTGAATACAGACACTTACAAACAGCCGCTTCAGCCAGGTGAATGTTGGGGGTTCGAGCTCTGTTTGGCATTGGTCTTCTTGTGACGTCACGAGGAGGCTTCGTCCTGACACACACACGAGCATGTTCATCTGCTGCCTCTAACATCTACAGTAAACACCTCACGCACAGACCCACCTGCACTATGGCCAATACCGGGGTCAAATACCTGGGTCAGGAGGAGGCTCAGCAGATTGACGAGGAGCTGTTCAGCGACTTCAGCTTCAGTGTGGATCAGCTGATGGAGCTGGCGGGTTTAAGCTGCGCTACTGCGGTGGCAAAGGGTTACCCTGTAACATCACTGCTTAAGAGTCCAGCCAGGGTCCTGGTCATCTGTGGGCCAGGAAACAACGGAGGAGACGGCCTGGTGTGTGCCAGACACCTCAAACTATTTGGTTATGAGCCATCTGTATTGTACCCGAAGCGGCCCAACAAACAGCTGTTCCAGAACCTGTCCATCCAGTGTCAGAAGATGGAGATTCCCTTCCTGACGGAGATGCCGGAGGCTGACTTGATCGATGAAGCGTATAGCCTGGTTGTGGACGCCATTTTTGGCTTCAGTTTTAAGGGTGCCGTCAGAGAGCCGTTTGGAGAAATCCTCTCCCAGCTAAAGAAAATCACCGTGCCCATTGCTAGTGTGGACATTCCTTCAGGCTGGGATGTGGAGAAAGGATGTCCTGACGGGATTCAGCCTGATATGCTGATCTCCCTCACAGCTCCAAAGAAATCAGCGGCTCTCTTTAAAGGACGCTTTCATTTTCTGGGCGGACGGTTCGTTCCTCCTGTGCTTGAACAGAAGTATCAGCTCAATCTGCCTCAGTACCCGGGCACAGagtgtgtgtttcagctcaaCTGAACATCTACATAGCTGCTAGtccaaaaaaaacagaaaaagcttCTGGAATAAATTTGCTCTGAACAcatattttgcttttttaataatgGGCAGATTTGGATTTGATGATTAATGAGGTTCGAGTCATGAATGTCAAATAGTTAGCAAGGTTGGTTAGAATGTTTCAAAAGCACTATTCTGATTTGATTATATGTGGATTtataaaaacctaaaataaataaaacaaatttcttGGAA

Function

symbol description
naxe Predicted to enable NADHX epimerase activity. Predicted to act upstream of or within lipid transport. Predicted to be located in extracellular region. Predicted to be active in mitochondrion. Orthologous to human NAXE (NAD(P)HX epimerase).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005739 mitochondrion cellular_component
GO:0005515 protein binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016853 isomerase activity molecular_function
GO:0052856 NADHX epimerase activity molecular_function
GO:0052857 NADPHX epimerase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-362 Predicted to enable NADHX epimerase activity. Predicted to act upstream of or within lipid transport. Predicted to be located in extracellular region. Predicted to be active in mitochondrion. Orthologous to human NAXE (NAD(P)HX epimerase).

Ensembl:

ensembl_id ENSDARG00000058806

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027659 True 1307 mRNA 0.46 7 7408235 7412647

Neighbor

gene id symbol gene type direction distance location
XLOC_013836 sqleb coding upstream 99982 7299865 ~ 7308253 (+)
XLOC_013837 FP085394.1 coding upstream 101672 7306467 ~ 7306563 (+)
XLOC_013835 ccdc127b coding upstream 112309 7292445 ~ 7295926 (+)
XLOC_013834 NA coding upstream 132881 7274583 ~ 7275354 (+)
XLOC_013832 FP101875.1 coding upstream 140209 7242117 ~ 7268026 (+)
XLOC_013839 sf3b4 coding downstream 11700 7424347 ~ 7430858 (+)
XLOC_013840 mindy1 coding downstream 41349 7453996 ~ 7478597 (+)
XLOC_013841 BX927401.3 coding downstream 71570 7484217 ~ 7484331 (+)
XLOC_013842 mrpl24 coding downstream 83144 7495791 ~ 7506134 (+)
XLOC_013843 prcc coding downstream 93733 7506380 ~ 7540094 (+)
XLOC_013833 NA non-coding upstream 158875 7244699 ~ 7249360 (+)
XLOC_013824 FP085393.1 non-coding upstream 372915 7035206 ~ 7035320 (+)
XLOC_013862 NA non-coding downstream 548874 7961521 ~ 7965420 (+)
XLOC_013863 CR936442.1 non-coding downstream 553469 7966116 ~ 7968667 (+)
XLOC_013865 BX545847.1 non-coding downstream 886347 8298994 ~ 8299110 (+)
XLOC_013866 NA non-coding downstream 1010265 8422912 ~ 8424378 (+)

Expression


Co-expression Network