G506678


Basic Information

Item Value
gene id G506678
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 125482 ~ 125723 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU580928
GATCCCTCCTGCTTAATCAACATTAGTGATCACTGAGGCAAGGAAAAGGCTGTCGCATATGCCAAAGTTTCTGAAAGTGTAATTATTTCATTTGATCCCAAGAGTTCTTGATGTTACAGATTTTGTTCATTTGTTTTGGGGGTTTACCTTTTATAACAGCTGGGAATAAACATGCCAGATTTCAGTTATATGTTTTTAGGACTGAACATACAGGACTCTCTTCATTACACTCTGAATTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580928 True 242 lncRNA 0.37 1 125482 125723

Neighbor

gene id symbol gene type direction distance location
CI01000350_00110973_00120683 NA coding upstream 4799 108898 ~ 120683 (+)
CI01000350_00095230_00102190 NA coding upstream 22908 95230 ~ 102574 (+)
CI01000350_00048651_00049682 NA coding upstream 75016 48443 ~ 50466 (+)
CI01000350_00014076_00015551 NA coding upstream 109568 14076 ~ 15914 (+)
CI01000350_00133984_00139525 CLDN10B coding downstream 8261 133984 ~ 139964 (+)
CI01000350_00140280_00143769 NA coding downstream 14430 140153 ~ 143804 (+)
CI01000350_00146107_00147209 NA coding downstream 20193 145916 ~ 147275 (+)
CI01000350_00249103_00250406 NA coding downstream 123380 249103 ~ 250628 (+)
CI01000350_00260761_00261744 NA coding downstream 134906 260629 ~ 261809 (+)
G506679 NA non-coding downstream 24551 150274 ~ 150659 (+)
G506655 NA non-coding downstream 36916 162639 ~ 166302 (+)
G506680 NA non-coding downstream 52067 177790 ~ 181043 (+)
G506686 NA non-coding downstream 57930 183653 ~ 183956 (+)
G506688 NA non-coding downstream 61285 187008 ~ 187218 (+)
G506786 NA other downstream 373373 499096 ~ 500756 (+)
G506911 NA other downstream 639587 765310 ~ 766111 (+)
G506858 NA other downstream 852368 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1328840 1454563 ~ 1462490 (+)
G507699 NA other downstream 1389986 1515709 ~ 1519828 (+)

Expression


Co-expression Network