G506679


Basic Information

Item Value
gene id G506679
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 150274 ~ 150659 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU580929
ATTTTTTTGTAACCTTGGGCAGATCTGTGCCTTGCCACAATTCTGTCTCTGAGCTCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTGACATGCACTGTGAGCTGTAAGGTCTTATATAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCGAATGAAGGTGTAGAACCATCTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGG
>TU580930
ATTTTTTTGTAACCTTGGGCAGATCTGTGCCTTGCCACAATTCTGTCTCTGAGCTCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTGACATGCACTGTGAGCTGTAAGGTCTTATATAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCGAATGAAGGTGTAGAACCATCTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580929 False 364 lncRNA 0.39 1 150274 150637
TU580930 True 386 lncRNA 0.39 1 150274 150659

Neighbor

gene id symbol gene type direction distance location
CI01000350_00146107_00147209 NA coding upstream 2999 145916 ~ 147275 (+)
CI01000350_00140280_00143769 NA coding upstream 6470 140153 ~ 143804 (+)
CI01000350_00133984_00139525 CLDN10B coding upstream 10310 133984 ~ 139964 (+)
CI01000350_00110973_00120683 NA coding upstream 29591 108898 ~ 120683 (+)
CI01000350_00095230_00102190 NA coding upstream 47700 95230 ~ 102574 (+)
CI01000350_00249103_00250406 NA coding downstream 98444 249103 ~ 250628 (+)
CI01000350_00260761_00261744 NA coding downstream 109970 260629 ~ 261809 (+)
CI01000350_00266537_00276376 NA coding downstream 114613 265272 ~ 276791 (+)
CI01000350_00277505_00278977 NA coding downstream 126514 277173 ~ 279752 (+)
CI01000350_00299478_00304914 NA coding downstream 148603 299262 ~ 305567 (+)
G506678 NA non-coding upstream 24551 125482 ~ 125723 (+)
G506655 NA non-coding downstream 11980 162639 ~ 166302 (+)
G506680 NA non-coding downstream 27131 177790 ~ 181043 (+)
G506686 NA non-coding downstream 32994 183653 ~ 183956 (+)
G506688 NA non-coding downstream 36349 187008 ~ 187218 (+)
G506689 NA non-coding downstream 38947 189606 ~ 189885 (+)
G506786 NA other downstream 348437 499096 ~ 500756 (+)
G506911 NA other downstream 614651 765310 ~ 766111 (+)
G506858 NA other downstream 827432 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1303904 1454563 ~ 1462490 (+)
G507699 NA other downstream 1365050 1515709 ~ 1519828 (+)

Expression


Co-expression Network