G506689


Basic Information

Item Value
gene id G506689
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 189606 ~ 189885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU580954
GGCAAGGCAGAAGGACACAGGATTTCCAACAAAAAAAAGTTTTATTTTATCCAAAAAAATTAAGAAAAAATAAGAATACAAAAATAAATCAACTTAACCTAACAAATAACCTAGCTAGATTAAGATAACTGAGGTCAACAGAACAAAACTCAACTCTTAACTCAAAATAAAGAGTAACTAAAGAGAACTGAACAAAACTGACCCCCTAACTAAGACAAAACCCAGGTATTTAAGACAAACGGTGAGCTCACTTAAACAAGACAGGGGAAAACATACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU580954 True 280 lncRNA 0.32 1 189606 189885

Neighbor

gene id symbol gene type direction distance location
CI01000350_00146107_00147209 NA coding upstream 42331 145916 ~ 147275 (+)
CI01000350_00140280_00143769 NA coding upstream 45802 140153 ~ 143804 (+)
CI01000350_00133984_00139525 CLDN10B coding upstream 49642 133984 ~ 139964 (+)
CI01000350_00110973_00120683 NA coding upstream 68923 108898 ~ 120683 (+)
CI01000350_00095230_00102190 NA coding upstream 87032 95230 ~ 102574 (+)
CI01000350_00249103_00250406 NA coding downstream 59218 249103 ~ 250628 (+)
CI01000350_00260761_00261744 NA coding downstream 70744 260629 ~ 261809 (+)
CI01000350_00266537_00276376 NA coding downstream 75387 265272 ~ 276791 (+)
CI01000350_00277505_00278977 NA coding downstream 87288 277173 ~ 279752 (+)
CI01000350_00299478_00304914 NA coding downstream 109377 299262 ~ 305567 (+)
G506688 NA non-coding upstream 2388 187008 ~ 187218 (+)
G506686 NA non-coding upstream 5650 183653 ~ 183956 (+)
G506680 NA non-coding upstream 8563 177790 ~ 181043 (+)
G506655 NA non-coding upstream 23304 162639 ~ 166302 (+)
G506679 NA non-coding upstream 38947 150274 ~ 150659 (+)
G506690 NA non-coding downstream 6840 196725 ~ 205705 (+)
G506694 NA non-coding downstream 28319 218204 ~ 218694 (+)
G506699 NA non-coding downstream 37134 227019 ~ 230363 (+)
G506704 NA non-coding downstream 52561 242446 ~ 349154 (+)
G506786 NA other downstream 309211 499096 ~ 500756 (+)
G506911 NA other downstream 575425 765310 ~ 766111 (+)
G506858 NA other downstream 788206 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 1264678 1454563 ~ 1462490 (+)
G507699 NA other downstream 1325824 1515709 ~ 1519828 (+)

Expression


Co-expression Network