G506855


Basic Information

Item Value
gene id G506855
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 694051 ~ 694882 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU581183
TCACCCCCTCTGCATTATGATGAAACTGAATGAAAATGCATCAATGATTGTTCACAGAACACTTATTGCTGGTGTTTCATCCCCAGGAAGTCCATACACCAACACTGCTTAGACTAGTTTATGTCAAAGATGTAGAATGCTTTAAAGCAAACTTCTACTGCAGCTAGCAATGTATTTTGATCAACGAACATAAACAGAAGCTCTTGTTGTGACTTGTTGAAAATCACATATATATTGTTGAAAAAGAAATATGTACTTGCCTTGACAGATTGATTAAATAAGGAAGTTTGCATTTAGTTAGATTTAAATTGGCATAAAGTAGTTACATGGAAAAATTGTGACTAAACTGTGACTGATATTGGTTGAAACATCTTTGCTGACTTTGTAAATGCACATCAATTAAAAAAAGAATTGTGTCATAATACATCTGTATATACTGATGTACACAAGCTTTAAAACAAACATGCATAAATGAACAATTAACAAATTAAGAAATTAAGTTCGCAATTGTAAAGTTCATATTGTAGTTCTTTATCAATTGGAATTTTTTTAAAGAAACAGACCTTGTTGAACATAGTTTTCCTCATGATGTGTGTTTCCTAAATCTTCCTCCACATTCAGTGGGTTGTTGTTTTTGGTGGGATCATTTTTAGATGCACTAATTAACTGAGCATCACTTGATGACACTCTCTCATATAATGTCTGTTCAGGAATCAGATACTGGGCTTGAACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581183 True 734 lncRNA 0.33 2 694051 694882

Neighbor

gene id symbol gene type direction distance location
CI01000350_00586494_00587461 NA coding upstream 106368 586494 ~ 587683 (+)
CI01000350_00457534_00503845 NA coding upstream 190086 457057 ~ 503965 (+)
CI01000350_00361432_00364007 NA coding upstream 329973 361432 ~ 364078 (+)
CI01000350_00324715_00343520 MAP3K12 coding upstream 349773 324715 ~ 344278 (+)
CI01000350_00299478_00304914 NA coding upstream 388484 299262 ~ 305567 (+)
CI01000350_00825304_00827619 NA coding downstream 130422 825304 ~ 827675 (+)
CI01000350_00856394_00860868 NA coding downstream 161512 856394 ~ 861076 (+)
CI01000350_00887155_00896486 NA coding downstream 192235 887117 ~ 898009 (+)
CI01000350_01039300_01048692 NA coding downstream 343271 1038153 ~ 1048845 (+)
CI01000350_01068561_01071605 NA coding downstream 373529 1068411 ~ 1071779 (+)
G506805 NA non-coding upstream 121434 572152 ~ 572617 (+)
G506804 NA non-coding upstream 122054 571162 ~ 571997 (+)
G506807 NA non-coding upstream 123208 570276 ~ 570843 (+)
G506775 NA non-coding upstream 131424 475125 ~ 562627 (+)
G506760 NA non-coding upstream 302126 391711 ~ 391925 (+)
G506867 NA non-coding downstream 11037 705919 ~ 707274 (+)
G506906 NA non-coding downstream 54936 749818 ~ 758214 (+)
G506920 NA non-coding downstream 78474 773356 ~ 773885 (+)
G506943 NA non-coding downstream 170292 865174 ~ 869870 (+)
G506964 NA non-coding downstream 185462 880344 ~ 881175 (+)
G506786 NA other upstream 193295 499096 ~ 500756 (+)
G506911 NA other downstream 70428 765310 ~ 766111 (+)
G506858 NA other downstream 283209 978091 ~ 978891 (+)
CI01000350_01454880_01462490 NA other downstream 759681 1454563 ~ 1462490 (+)
G507699 NA other downstream 820827 1515709 ~ 1519828 (+)
CI01000350_02387606_02388868 NA other downstream 1692741 2387560 ~ 2388902 (+)

Expression


Co-expression Network