Item | Value |
---|---|
gene id | G507024 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000350 |
NCBI id | null |
chromosome length | 2572209 |
location | 1062933 ~ 1063328 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
description |
---|
unnamed protein product |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU581372 | True | 396 | lncRNA | 0.30 | 1 | 1062933 | 1063328 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000350_01039300_01048692 | NA | coding | upstream | 14088 | 1038153 ~ 1048845 (+) |
CI01000350_00887155_00896486 | NA | coding | upstream | 164924 | 887117 ~ 898009 (+) |
CI01000350_00856394_00860868 | NA | coding | upstream | 201857 | 856394 ~ 861076 (+) |
CI01000350_00825304_00827619 | NA | coding | upstream | 235258 | 825304 ~ 827675 (+) |
CI01000350_00586494_00587461 | NA | coding | upstream | 475250 | 586494 ~ 587683 (+) |
CI01000350_01068561_01071605 | NA | coding | downstream | 5083 | 1068411 ~ 1071779 (+) |
CI01000350_01100195_01101995 | NA | coding | downstream | 36867 | 1100195 ~ 1102438 (+) |
CI01000350_01110658_01123802 | NA | coding | downstream | 47330 | 1110658 ~ 1124225 (+) |
CI01000350_01136425_01169812 | NA | coding | downstream | 73097 | 1136425 ~ 1169812 (+) |
CI01000350_01268618_01269611 | NA | coding | downstream | 205197 | 1268525 ~ 1269786 (+) |
G506800 | NA | non-coding | upstream | 45911 | 1015972 ~ 1017022 (+) |
G506813 | NA | non-coding | upstream | 58075 | 1004530 ~ 1004858 (+) |
G506996 | NA | non-coding | upstream | 106023 | 956678 ~ 956910 (+) |
G506964 | NA | non-coding | upstream | 181758 | 880344 ~ 881175 (+) |
G506943 | NA | non-coding | upstream | 193063 | 865174 ~ 869870 (+) |
G507059 | NA | non-coding | downstream | 123823 | 1187151 ~ 1217232 (+) |
G507078 | NA | non-coding | downstream | 126776 | 1190104 ~ 1253441 (+) |
G507123 | NA | non-coding | downstream | 242970 | 1306298 ~ 1313026 (+) |
G507125 | NA | non-coding | downstream | 244006 | 1307334 ~ 1307891 (+) |
CI01000350_01343443_01355860 | NA | non-coding | downstream | 290092 | 1343102 ~ 1356215 (+) |
G506858 | NA | other | upstream | 84042 | 978091 ~ 978891 (+) |
G506911 | NA | other | upstream | 296822 | 765310 ~ 766111 (+) |
G506786 | NA | other | upstream | 562177 | 499096 ~ 500756 (+) |
CI01000350_01454880_01462490 | NA | other | downstream | 391235 | 1454563 ~ 1462490 (+) |
G507699 | NA | other | downstream | 452381 | 1515709 ~ 1519828 (+) |
CI01000350_02387606_02388868 | NA | other | downstream | 1324295 | 2387560 ~ 2388902 (+) |