G507939


Basic Information

Item Value
gene id G507939
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1910343 ~ 1923325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU582481
GGATAATCCTAGAATGTTTTCATCAAAAACCTTAATTTCTTTTCGACTGAAGAAAGAAGGACATGGACATCTTGGATGACATGGGGCGACATCTCTTCTCTTCTCTGATGACGAGGGCGGGGCAACCTGTCACTCATATGAGATCCACCAATAGAAAACCACAACCATCCAATCAATTCACCATGGACAAAATCAAGCCCCGCCCTACATTTGTTCTTGTTCGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582481 True 226 lncRNA 0.43 2 1910343 1923325

Neighbor

gene id symbol gene type direction distance location
CI01000350_01860321_01869386 PDK1 coding upstream 40224 1859899 ~ 1870119 (+)
CI01000350_01748423_01750654 NA coding upstream 159287 1748423 ~ 1751056 (+)
CI01000350_01625265_01628425 DLX2A, DLX2 coding upstream 281719 1625143 ~ 1628624 (+)
CI01000350_01583582_01585575 NA coding upstream 324379 1583483 ~ 1585964 (+)
CI01000350_01454880_01462490 NA coding upstream 447853 1454563 ~ 1462490 (+)
CI01000350_02051537_02098878 ZAK coding downstream 128212 2051537 ~ 2099018 (+)
CI01000350_02100526_02105123 CDCA7A coding downstream 177201 2100526 ~ 2105265 (+)
CI01000350_02225123_02231703 NA coding downstream 301722 2225047 ~ 2232060 (+)
CI01000350_02326331_02328418 SP9 coding downstream 403006 2326331 ~ 2328925 (+)
CI01000350_02342610_02352568 SCRN3 coding downstream 419285 2342610 ~ 2353306 (+)
G507915 NA non-coding upstream 88700 1819526 ~ 1821643 (+)
G507913 NA non-coding upstream 90890 1817797 ~ 1819453 (+)
G507864 NA non-coding upstream 140737 1768150 ~ 1769606 (+)
G507833 NA non-coding upstream 217916 1691531 ~ 1692427 (+)
G507847 NA non-coding upstream 247347 1662691 ~ 1662996 (+)
G508031 NA non-coding downstream 249241 2172566 ~ 2172808 (+)
G508033 NA non-coding downstream 252251 2175576 ~ 2175836 (+)
G508034 NA non-coding downstream 252608 2175933 ~ 2176152 (+)
G507961 NA non-coding downstream 254831 2178156 ~ 2179980 (+)
G507974 NA non-coding downstream 256847 2180172 ~ 2180438 (+)
G507699 NA other upstream 390515 1515709 ~ 1519828 (+)
G506858 NA other upstream 931452 978091 ~ 978891 (+)
G506911 NA other upstream 1144232 765310 ~ 766111 (+)
G506786 NA other upstream 1409587 499096 ~ 500756 (+)
CI01000350_02387606_02388868 NA other downstream 464298 2387560 ~ 2388902 (+)

Expression


Co-expression Network