G508038


Basic Information

Item Value
gene id G508038
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 2195838 ~ 2196343 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU582589
GTCATTTTCAGTTGCCTCAAAATAGCAACACGCCAACAATGCGTATTTATTGATTTATTTTTGTTATTTAAAGGGTGCGTTAATAATATGCGCCTATAGGCGAGTGCACAACGCACGTTCACTCTGCTTGTTACACACACAGGGACACGCAGCAGCACACAAACATGCCAGATATTAAAAATAAAAGGATTACAATGTAAAAGATTATTATTATTGTGTACATAAAGATAAAAATGCCTACATGTCATAATGGATAGTCATTGCATGTATCAGAATTACCTATTTGCAGTAATGATGAATGAAATTGGCTAATTATTTGACCAATCGTGGCAATACACACATGTAAACTGCCTCGTCAGGTTGAGGGTGTCTATATTCCTCCATGTAAATAGCGAATCCGCCATGGTGCAAGCGCACCTGGCTTTTAAAGGGAATGGGAGATAGACTCTGATTGTTTTTTTGCACATTACACTCAAAACACACCTATTACTCATTAAAGGGGGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582589 True 506 lncRNA 0.38 1 2195838 2196343

Neighbor

gene id symbol gene type direction distance location
CI01000350_02100526_02105123 CDCA7A coding upstream 90573 2100526 ~ 2105265 (+)
CI01000350_02051537_02098878 ZAK coding upstream 96820 2051537 ~ 2099018 (+)
CI01000350_01860321_01869386 PDK1 coding upstream 325719 1859899 ~ 1870119 (+)
CI01000350_01748423_01750654 NA coding upstream 444782 1748423 ~ 1751056 (+)
CI01000350_01625265_01628425 DLX2A, DLX2 coding upstream 567214 1625143 ~ 1628624 (+)
CI01000350_02225123_02231703 NA coding downstream 28704 2225047 ~ 2232060 (+)
CI01000350_02326331_02328418 SP9 coding downstream 129988 2326331 ~ 2328925 (+)
CI01000350_02342610_02352568 SCRN3 coding downstream 146267 2342610 ~ 2353306 (+)
CI01000350_02387606_02388868 NA coding downstream 191217 2387560 ~ 2388902 (+)
CI01000350_02502767_02507641 BZW1, BZW1B coding downstream 305683 2502026 ~ 2507641 (+)
G507966 NA non-coding upstream 4944 2187286 ~ 2190894 (+)
G507974 NA non-coding upstream 15400 2180172 ~ 2180438 (+)
G507961 NA non-coding upstream 15858 2178156 ~ 2179980 (+)
G508034 NA non-coding upstream 19686 2175933 ~ 2176152 (+)
G508033 NA non-coding upstream 20002 2175576 ~ 2175836 (+)
G508066 NA non-coding downstream 41019 2237362 ~ 2237593 (+)
G507953 NA non-coding downstream 44182 2240525 ~ 2242441 (+)
G508080 NA non-coding downstream 74692 2271035 ~ 2271269 (+)
G508082 NA non-coding downstream 82917 2279260 ~ 2279473 (+)
G508083 NA non-coding downstream 83316 2279659 ~ 2279865 (+)
G507699 NA other upstream 676010 1515709 ~ 1519828 (+)
CI01000350_01454880_01462490 NA other upstream 733601 1454563 ~ 1462490 (+)
G506858 NA other upstream 1216947 978091 ~ 978891 (+)
G506911 NA other upstream 1429727 765310 ~ 766111 (+)
G506786 NA other upstream 1695082 499096 ~ 500756 (+)

Expression


Co-expression Network