XLOC_013856 (si:dkeyp-85e10.3)


Basic Information

Item Value
gene id XLOC_013856
gene name si:dkeyp-85e10.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 7864767 ~ 7873836 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027696
CAGTATGTCATAGTAGAGCACTGTGTCTGTTTGCTCGAGCATCTACTTGGCAACCCTCCATTAGTACTGCGGTGCATCAAGGGATTCTGCTTTCAAAATACCACATTCTATTAACATCCTGGGGGTCATCTAGAACATAAACAAAAGACACAGGAAGGCATAATTTTTGGCCACAGGACCACCATGTATGCAGTTGTAACCCTAGAAAAATCAGAAGAGGTGATGGTGACAGCATCAAACTGGTTGAGCGAAGGCAAAAAACAATGTTACTGGCCTCCATACAAATCATCAGAGAAATTAATGGAAGCTGTTCAGAAAGGATTAGCACCTCAAACAGGAGAGAAATCTTGGGAGAAATTAGCTGTCCTGTTTCATGGAGAATATGGCACTTATGAGGAGGCCAATAAAAaacgaaaagaaatgaatgagcAGACAGAACAAGCAGCCACAGCAGTGAATCAAGTAACAGGAACCTGTCCACAGTCTCCTGGGCCATCTCAGTCAGGAATTTCACAGAATGCCAGTGGCACAAAAAGAAAACGTGAATCGAGAGATTTACTGATCAGTGCTAAATCATATTCAGATATAGAAATATTGAATATAGCAAAAAAGATCATGAATGAAGTTGATGATAGACTTCGAAACATTACCAGCACAGACCAAAAAACAAATGAGATAAAAAACACCATTTTAGATTCCATTGCAAAAATGAAGGAGATGGACAAAGACAAAAGAAGAAAGGAAACCATTGGTGTTTTTGGCAAAACAGGAGAAGGAAAAAGCTCTTTATTAAATGCAGTGTTGGGATTAGAGGGTCTGCTGCCATCTGGTAGTCTTGGTGCCTGTACAGCAGTTATTACTCAAGTGGAAGCAAATCTGGAGGACTCTAAATACATAGCTGAGATTGAGCTTATCTCTAAAGagGAATGGGAGAATGAGATTGCTTCCACTGATGAAAGGACTGATACAGATAACGAAAGGATAATTGCAGTGTATGGGGCTGATGCAGATAAGAAATCTCTGGAAGAACTTAAGAAAGATGCCAAATATGCTGAAATTGATCAATTTTTGTCTATTGGGAAAAAAACGATTTCACACTCTGAAgtaaggg
>TCONS_00027697
GAGCACTGTGTCTGTTTGCTCGAGCATCTACTTGGCAACCCTCCATTAGTACTGCGGTGCATCAAGGGATTCTGCTTTCAAAATACCACATTCTATTAACATCCTGGGGGTCATCTAGAACATAAACAAAAGACACAGGAAGGCATAATTTTTGGCCACAGgGAATGTGCTAAGCTGAGGATCTTGTGAAAGCTGATCTGTCATGGATTCACACACCATTAACTTCATCACCTGGAATATTAACGGACTTAAGCAAAACAAGTATCAGAAATTTCAAGAACTTCAATGCGCTGATGTTGTTTTCTTACAAGAGACACACATTGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092878

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027696 False 1111 mRNA 0.40 8 7864767 7873836
TCONS_00027697 True 324 mRNA 0.41 2 7864782 7869205

Neighbor

gene id symbol gene type direction distance location
XLOC_013855 nuggc.1 coding upstream 3487 7838644 ~ 7861280 (+)
XLOC_013854 cks1b coding upstream 26535 7835025 ~ 7838232 (+)
XLOC_013853 aqp10b coding upstream 47881 7810028 ~ 7816886 (+)
XLOC_013852 hax1 coding upstream 59635 7799036 ~ 7805132 (+)
XLOC_013851 ubap2l coding upstream 66815 7757682 ~ 7797952 (+)
XLOC_013857 nuggc.2 coding downstream 4286 7878122 ~ 7886461 (+)
XLOC_013858 nuggc.3 coding downstream 21250 7895086 ~ 7923910 (+)
XLOC_013859 si:dkey-266f7.4 coding downstream 55868 7929704 ~ 7931923 (+)
XLOC_013860 si:dkey-266f7.5 coding downstream 64285 7938121 ~ 7950953 (+)
XLOC_013861 si:dkey-266f7.10 coding downstream 80843 7954679 ~ 7957870 (+)
XLOC_013841 BX927401.3 non-coding upstream 380436 7484217 ~ 7484331 (+)
XLOC_013837 FP085394.1 non-coding upstream 558204 7306467 ~ 7306563 (+)
XLOC_013834 NA non-coding upstream 589413 7274583 ~ 7275354 (+)
XLOC_013832 FP101875.1 non-coding upstream 596741 7242117 ~ 7268026 (+)
XLOC_013862 NA non-coding downstream 87685 7961521 ~ 7965420 (+)
XLOC_013863 CR936442.1 non-coding downstream 92280 7966116 ~ 7968667 (+)
XLOC_013865 BX545847.1 non-coding downstream 425158 8298994 ~ 8299110 (+)
XLOC_013866 NA non-coding downstream 549076 8422912 ~ 8424378 (+)
XLOC_013870 NA non-coding downstream 799846 8673682 ~ 8677972 (+)

Expression


Co-expression Network