G508172


Basic Information

Item Value
gene id G508172
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 2518412 ~ 2518828 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU582724
AGACAAGCTACTTTTTTACTCTGACAAGTAAATGACCAACTTAGTTGTCCAAAGGACAAGCTCAATACAAGGCTTAATGTCGAGCACTGTATTTTGTATTTATATTCTCTGCTTTAATGGTAGCATCACTCTTATATTTGATACTGACACAAAGGAGAAGGCACAGGCCTAAGATTTTATTGTCATCAGATGTAGCTTTGCACACTACCAGCATCTATAGAATGATTTTGATCAGCATTTTATTGTTCATAGCAGAGGGCTCTCTCAACTTGTTATATTTTAGTTTGTCAAATGATACGATTTTGTAGTCTGTGCATACAGATGCACCCCTCAGAAGCCTGAAACCACAGAGCCCCCCCATATAACAAATCCCAATTTAACCCCTGGATATAACCACAGTGGGACTACTAATGCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582724 True 417 lncRNA 0.38 1 2518412 2518828

Neighbor

gene id symbol gene type direction distance location
CI01000350_02502767_02507641 BZW1, BZW1B coding upstream 10771 2502026 ~ 2507641 (+)
CI01000350_02387606_02388868 NA coding upstream 129510 2387560 ~ 2388902 (+)
CI01000350_02342610_02352568 SCRN3 coding upstream 165106 2342610 ~ 2353306 (+)
CI01000350_02326331_02328418 SP9 coding upstream 189487 2326331 ~ 2328925 (+)
CI01000350_02225123_02231703 NA coding upstream 286352 2225047 ~ 2232060 (+)
CI01000350_02564422_02569042 NA coding downstream 45594 2564422 ~ 2570021 (+)
G508158 NA non-coding upstream 33407 2484736 ~ 2485005 (+)
G508145 NA non-coding upstream 62845 2455062 ~ 2455567 (+)
G508099 NA non-coding upstream 150126 2367863 ~ 2368286 (+)
G507963 NA non-coding upstream 186349 2331307 ~ 2332063 (+)
G508090 NA non-coding upstream 216837 2301337 ~ 2301575 (+)
G508182 NA non-coding downstream 36351 2555179 ~ 2555413 (+)
G508137 NA non-coding downstream 37492 2556320 ~ 2556577 (+)
G507699 NA other upstream 998584 1515709 ~ 1519828 (+)
CI01000350_01454880_01462490 NA other upstream 1056175 1454563 ~ 1462490 (+)
G506858 NA other upstream 1539521 978091 ~ 978891 (+)
G506911 NA other upstream 1752301 765310 ~ 766111 (+)

Expression


Co-expression Network