XLOC_013866



Basic Information


Item Value
gene id XLOC_013866
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 8422912 ~ 8424378 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00029872
TCCATGTAAAGCATTACAAAGCAgtttgtcctgccatgttttgatccttttcattgtttgttttacTGACAAATATTGTTAgAAGTGACAGATTTGGTGAAATGAAGCATTATGGATGGATGTCCGCTGGCGAATGCCATTGGCCTTGTCAACAGTCGGGCCATGACGAAAATGGGTCAAGCAGAAAAAAATGGGGGTCATCTGTTTGGATTATGAACTAGTACTTGATTATCTAGCCCTCGGGTTGCTCTCATGAGGAGCCAGTCCCTGAACGGAGACAATATGAACTGAATCGATTTCATGCACAGATTAACACATGTTTCTGTCCAAAAACAGCTGTGATGCTTTATATTtgatcatttacaaaaaaaaaataaataaataaatc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00029872 True 388 lncRNA 0.38 2 8422912 8424378

Neighbor


gene id symbol gene type direction distance location
XLOC_013864 efna3a coding upstream 83052 8144556 ~ 8339860 (+)
XLOC_013865 BX545847.1 coding upstream 123802 8298994 ~ 8299110 (+)
XLOC_013863 CR936442.1 coding upstream 454245 7966116 ~ 7968667 (+)
XLOC_013862 NA coding upstream 457492 7961521 ~ 7965420 (+)
XLOC_013861 si:dkey-266f7.10 coding upstream 465042 7954679 ~ 7957870 (+)
XLOC_013867 efna1a coding downstream 57424 8481802 ~ 8502321 (+)
XLOC_013868 s100a10a coding downstream 81800 8506178 ~ 8608414 (+)
XLOC_013869 snx27a coding downstream 188461 8612839 ~ 8647894 (+)
XLOC_013870 NA coding downstream 249304 8673682 ~ 8677972 (+)
XLOC_013871 NA coding downstream 336494 8760872 ~ 8761674 (+)
XLOC_013841 BX927401.3 non-coding upstream 938581 7484217 ~ 7484331 (+)
XLOC_013837 FP085394.1 non-coding upstream 1116349 7306467 ~ 7306563 (+)
XLOC_013872 NA non-coding downstream 511957 8936335 ~ 8936623 (+)
XLOC_013887 BX005154.1 non-coding downstream 957072 9381450 ~ 9427416 (+)
XLOC_013888 dre-let-7d-2 non-coding downstream 1005479 9429857 ~ 9429944 (+)

Expression



Co-expression Network