XLOC_013893 (BX927218.1)


Basic Information

Item Value
gene id XLOC_013893
gene name BX927218.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 9751075 ~ 9757016 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027766
GCAATGATCTTAAGCAGCACAGCATAGACTTACAAGATCACACACTACAGCAGTGTATTACAGTCAACCGTCTATTGGTATTTAAGGTGGCTGCAGATTAAGAGGGGCGATTCATGGTGTAGCATGACACAAGTTGGAGACTAATCACCCAGGTGACGGTGTCTGATGATCTTAGACCTGAAACACCCGAAGGTTCATCATTGATGATGTGTCACACTGCCTGTAGTATTAAAGAAgATACACATCCCTGTACAAATCCATGCGAAGGCTGCATTTGTCCTACAGGTCACCTCGCGAACCActaacccaaacccaaccaacagtgtcttCAAAAGCAAAGGTTATAGAACTGTGCACTGCAACCATGTACTgtgattttacatttatattatactATCTGGCCTCATTTGCACCATTATATCCTCCTGGACAAAACTTCTGTCCTGTAACTTGGGTGGCACCTTTTTAAGGTACATGTTTGTTCCTGGCTGcttaaaaggtacatattaacACCTAAAAAGTACCTCACAGTAACTTAAAGATACAAAAGTCAACTTAAAAATGCAAAAGTAAACCGTAAAGGTACAAAAGTATACCCTAAAGCAGGGGGCTATAACtgatctcattcctggaggtccggtgctctacagggtttagcttcaacttgcctcaacacacctgcctcggtgtttcaagtatacctagtaagaccttgattag

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0030154 cell differentiation biological_process
GO:0048513 animal organ development biological_process
GO:0006979 response to oxidative stress biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032502 developmental process biological_process
GO:0005576 extracellular region cellular_component
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function
GO:0055102 lipase inhibitor activity molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094472

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027766 True 720 lncRNA 0.42 2 9751075 9757016

Neighbor

gene id symbol gene type direction distance location
XLOC_013892 styk1a coding upstream 67497 9666961 ~ 9683578 (+)
XLOC_013891 fam131ba coding upstream 146960 9533008 ~ 9604115 (+)
XLOC_013890 si:ch211-288g17.3 coding upstream 290753 9455218 ~ 9460322 (+)
XLOC_013889 dre-mir-125a-2 coding upstream 307197 9443772 ~ 9443878 (+)
XLOC_013888 dre-let-7d-2 coding upstream 321131 9429857 ~ 9429944 (+)
XLOC_013894 cacng6a coding downstream 29706 9786722 ~ 9798248 (+)
XLOC_013895 NA coding downstream 81166 9838182 ~ 9866722 (+)
XLOC_013896 tmem238a coding downstream 574309 10331325 ~ 10333333 (+)
XLOC_013897 rcvrn3 coding downstream 582522 10339538 ~ 10352579 (+)
XLOC_013898 necap1 coding downstream 639026 10396042 ~ 10408029 (+)
XLOC_013887 BX005154.1 non-coding upstream 323659 9381450 ~ 9427416 (+)
XLOC_013872 NA non-coding upstream 814452 8936335 ~ 8936623 (+)
XLOC_013871 NA non-coding upstream 989401 8760872 ~ 8761674 (+)
XLOC_013906 CR384101.1 non-coding downstream 810355 10567371 ~ 10567486 (+)
XLOC_013918 CU628002.1 non-coding downstream 1256606 11013622 ~ 11014858 (+)
XLOC_013922 CU928061.1 non-coding downstream 1521397 11278413 ~ 11278529 (+)
XLOC_013928 NA non-coding downstream 2538434 12295450 ~ 12300891 (+)

Expression


Co-expression Network